Search results:
General Information
- Evidence
- Gene
- mRNA
- CDS
- Protein
- PTM
- Enzyme
- PPi
- Pathway
- Structural
- Domain
- Ontology
- SNP
- Drug
- External Links
Evidence Information
| Pubmed ID | Year | Sample Information | Techniques | Mechanism | Fold Change | Remark |
|---|---|---|---|---|---|---|
| 23963856    | 2013 | Cell line : - Source : - Sample Type : CRC tumor and Normal tissue No. of Sample : 75 Stage : TNM Stage I-IV | Methylation specific PCR | Hypermethylation | - | hypermethylation status in the promoter of FBN1 is a high specific and sensitive biomarker for colorectal cancer, and detecting hypermethylated FBNI in stool samples is a noninvasive and useful method for screening colorectal cancer. Out of 75 patients with colorectal cancer, 59 (78.7%) exhibited hypermethylated FBN1 in their tumor tissue DNA. |
Gene Details

| Gene Type | protein coding |
|---|---|
| Gene Family | |
| Description | This gene encodes a member of the fibrillin family. The encoded protein is a large, extracellular matrix glycoprotein that serve as a structural component of 10-12 nm calcium-binding microfibrils. These microfibrils provide force bearing structural support in elastic and nonelastic connective tissue throughout the body. Mutations in this gene are associated with Marfan syndrome, isolated ectopia lentis, autosomal dominant Weill-Marchesani syndrome, MASS syndrome, and Shprintzen-Goldberg craniosynostosis syndrome.   |
| Chromosome | 15 |
| Location | 15q21.1 |
| Start | 48408306   |
| End | 48645788   |
| Strand | -   |
| Gene Sequence |    Download   Select all |
| Length | 237483   |
| OMIM ID | 134797    |
| HGNC ID | HGNC:3603    |
| Unigene ID | Hs.591133    |
| Ensembl ID | ENSG00000166147    |
| PharmGKB ID | -    |
mRNA Information
| mRNA ID | NM_000138.4 |
|---|---|
| Exon | join(1..214,839..1183,32697..32779,34963..35061, 45555..45650,49411..49506,107981..108178,111584..111709, 119534..119659,124972..125130,129427..129606, 130262..130402,132121..132240,135620..135745, 137085..137207,140642..140764,141850..142002, 146751..146804,148398..148523,149564..149689, 150201..150320,150529..150666,151535..151585, 153203..153328,155711..155938,157296..157421, 157548..157676,158352..158477,158589..158714, 160293..160415,161846..161971,164009..164134, 171139..171261,171412..171534,173113..173238, 175033..175155,177255..177377,177687..177851, 179931..179999,180096..180221,181768..181890, 182549..182707,185472..185543,189027..189152, 193105..193227,196896..197021,198967..199083,   | mRNA Sequence |    Download   Select all |
| Length | 11695   |
CDS Information
| Location | join(1020..1183,32697..32779,34963..35061,45555..45650, 49411..49506,107981..108178,111584..111709,119534..119659, 124972..125130,129427..129606,130262..130402, 132121..132240,135620..135745,137085..137207, 140642..140764,141850..142002,146751..146804, 148398..148523,149564..149689,150201..150320, 150529..150666,151535..151585,153203..153328, 155711. |
|---|---|
| CDS Sequence |    Download   Select all |
| CCDS ID | CCDS32232.1 |    
Protein Information
| Protein ID | NP_000129.3 |
|---|---|
| Protein Name | fibrillin 1 |
| Molecular Wt. (Da) | 309399 |
| Protein Sequence |    Download   Select all |
| Length | 2871   |
| Uniprot ID | Q13888 |    
| Ensembl Protein ID | ENSP00000274400   |    
Post-translational Modification Information (Source : HPRD)
No matching records could be found.
Enzyme Information
No matching records could be found.
PPi Information
(Click to view network : Source STRING)      View   
| Interactant Gene ID (Source: HPRD) | Gene Symbol | HPRD ID | Ref Seq ID | Technique | References |
|---|---|---|---|---|---|
| 811 |    CALR |    169 |    NP_004334.1 |    in vivo |    10547375    |
| 1462 |    VCAN |    340 |    NP_004376.2 |    in vitro |    11726670    |
| 1634 |    DCN |    501 |    NP_001911.1 |    in vivo |    10793130    |
| 2006 |    ELN |    556 |    NP_000492.2 |    in vivo |    10825173    |
| 2201 |    FBN2 |    416 |    NP_001990.2 |    in vivo |    1   035   965   310   504   300    |
| 3339 |    HSPG2 |    804 |    NP_005520.4 |    in vitro |    15657057    |
Pathway Information
No matching records could be found.
Structure Information
| PDB ID | 1APJ |
|---|---|
| Resolution | |
| Method | SOLUTION NMR |
| Chains | A   |
| Molecule | FIBRILLIN   |
| Model | View |
Domain Information
| ID | Location | Description |
|---|---|---|
| cd00054 | 1808-1840  | EGF_CA |
| cl21504 | 1808-1840  | EGF_CA superfamily |
| cd00054 | 530-571  | EGF_CA |
| cl21504 | 530-571  | EGF_CA superfamily |
| cd00054 | 613-642  | EGF_CA |
| cl21504 | 613-642  | EGF_CA superfamily |
| cd00054 | 2127-2159  | EGF_CA |
| cl21504 | 2127-2159  | EGF_CA superfamily |
| cd00054 | 1322-1357  | EGF_CA |
| cl21504 | 1322-1357  | EGF_CA superfamily |
| cd00054 | 1113-1146  | EGF_CA |
| cl21504 | 1113-1146  | EGF_CA superfamily |
| cd00054 | 1363-1398  | EGF_CA |
| cl21504 | 1363-1398  | EGF_CA superfamily |
| cd00054 | 2607-2638  | EGF_CA |
| cl21504 | 2607-2638  | EGF_CA superfamily |
| cd00054 | 2567-2596  | EGF_CA |
| cl21504 | 2567-2596  | EGF_CA superfamily |
| cd00054 | 2166-2197  | EGF_CA |
| cl21504 | 2166-2197  | EGF_CA superfamily |
| cd00054 | 572-606  | EGF_CA |
| cl21504 | 572-606  | EGF_CA superfamily |
| cd00054 | 1973-2008  | EGF_CA |
| cl21504 | 1973-2008  | EGF_CA superfamily |
| cd00054 | 1648-1679  | EGF_CA |
| cl21504 | 1648-1679  | EGF_CA superfamily |
| cd00054 | 765-806  | EGF_CA |
| cl21504 | 765-806  | EGF_CA superfamily |
| cd00054 | 1446-1480  | EGF_CA |
| cl21504 | 1446-1480  | EGF_CA superfamily |
| cd00054 | 1487-1519  | EGF_CA |
| cl21504 | 1487-1519  | EGF_CA superfamily |
| pfam00683 | 1547-1588  | TB |
| cl02926 | 1547-1588  | TB superfamily |
| pfam00683 | 193-235  | TB |
| cl02926 | 193-235  | TB superfamily |
| pfam00683 | 2068-2110  | TB |
| cl02926 | 2068-2110  | TB superfamily |
| pfam00683 | 1704-1747  | TB |
| cl02926 | 1704-1747  | TB superfamily |
| pfam00683 | 2346-2389  | TB |
| cl02926 | 2346-2389  | TB superfamily |
| pfam00683 | 668-710  | TB |
| cl02926 | 668-710  | TB superfamily |
| pfam12947 | 1367-1402  | EGF_3 |
| pfam00683 | 966-1007  | TB |
| cl02926 | 966-1007  | TB superfamily |
| pfam00683 | 860-900  | TB |
| cl02926 | 860-900  | TB superfamily |
| cd01475 | 1194-1235  | vWA_Matrilin |
| cl00057 | 1194-1235  | vWFA superfamily |
| pfam00683 | 343-388  | TB |
| cl02926 | 343-388  | TB superfamily |
| smart00179 | 1808-1840  | EGF_CA |
| pfam12947 | 1326-1361  | EGF_3 |
| pfam14670 | 1201-1236  | FXa_inhibition |
| cl21504 | 1201-1236  | EGF_CA superfamily |
| pfam07645 | 1930-1971  | EGF_CA |
| cl21504 | 1930-1971  | EGF_CA superfamily |
| smart00179 | 530-571  | EGF_CA |
| smart00179 | 1930-1972  | EGF_CA |
| pfam07645 | 1322-1354  | EGF_CA |
| pfam12662 | 1953-1976  | cEGF |
| smart00179 | 613-646  | EGF_CA |
| pfam07645 | 1363-1402  | EGF_CA |
| cd01475 | 2442-2482  | vWA_Matrilin |
| cl00057 | 2442-2482  | vWFA superfamily |
| smart00179 | 2166-2205  | EGF_CA |
| pfam12662 | 1218-1241  | cEGF |
| smart00179 | 2127-2165  | EGF_CA |
| smart00179 | 2607-2638  | EGF_CA |
| smart00179 | 2567-2596  | EGF_CA |
| smart00179 | 1113-1149  | EGF_CA |
| cd01475 | 1925-1970  | vWA_Matrilin |
| cl00057 | 1925-1970  | vWFA superfamily |
| pfam14670 | 2448-2483  | FXa_inhibition |
| cl21504 | 2448-2483  | EGF_CA superfamily |
| pfam12662 | 2465-2488  | cEGF |
| smart00179 | 1363-1403  | EGF_CA |
| smart00179 | 572-612  | EGF_CA |
| cd01475 | 2480-2516  | vWA_Matrilin |
| cl00057 | 2480-2516  | vWFA superfamily |
| cd00054 | 1930-1972  | EGF_CA |
| smart00179 | 1648-1687  | EGF_CA |
| pfam12662 | 593-616  | cEGF |
| cd01475 | 2289-2328  | vWA_Matrilin |
| cl00057 | 2289-2328  | vWFA superfamily |
| smart00179 | 1322-1362  | EGF_CA |
| pfam07645 | 723-763  | EGF_CA |
| cl21504 | 723-763  | EGF_CA superfamily |
| smart00179 | 1606-1638  | EGF_CA |
| cl21504 | 1606-1638  | EGF_CA superfamily |
| cd01475 | 1847-1886  | vWA_Matrilin |
| cl00057 | 1847-1886  | vWFA superfamily |
| smart00179 | 288-329  | EGF_CA |
| cl21504 | 288-329  | EGF_CA superfamily |
| pfam07645 | 2485-2515  | EGF_CA |
| cl21504 | 2485-2515  | EGF_CA superfamily |
| pfam07645 | 2444-2483  | EGF_CA |
| smart00179 | 1446-1486  | EGF_CA |
| pfam07645 | 1808-1840  | EGF_CA |
| pfam07645 | 530-570  | EGF_CA |
| smart00179 | 2524-2566  | EGF_CA |
| cl21504 | 2524-2566  | EGF_CA superfamily |
| smart00179 | 1487-1518  | EGF_CA |
| pfam07645 | 2013-2053  | EGF_CA |
| cl21504 | 2013-2053  | EGF_CA superfamily |
| pfam07645 | 1606-1646  | EGF_CA |
| pfam07645 | 1766-1806  | EGF_CA |
| cl21504 | 1766-1806  | EGF_CA superfamily |
| cd01475 | 1603-1645  | vWA_Matrilin |
| cl00057 | 1603-1645  | vWFA superfamily |
| smart00179 | 1766-1797  | EGF_CA |
| smart00179 | 765-796  | EGF_CA |
| pfam07645 | 288-328  | EGF_CA |
| smart00179 | 1155-1188  | EGF_CA |
| cl21504 | 1155-1188  | EGF_CA superfamily |
| cd01475 | 2204-2243  | vWA_Matrilin |
| cl00057 | 2204-2243  | vWFA superfamily |
| cd01475 | 2006-2051  | vWA_Matrilin |
| cl00057 | 2006-2051  | vWFA superfamily |
| cd00054 | 1606-1639  | EGF_CA |
| cd01475 | 2562-2597  | vWA_Matrilin |
| cl00057 | 2562-2597  | vWFA superfamily |
| smart00179 | 490-521  | EGF_CA |
| cl21504 | 490-521  | EGF_CA superfamily |
| smart00179 | 1070-1104  | EGF_CA |
| cl21504 | 1070-1104  | EGF_CA superfamily |
| smart00179 | 2013-2054  | EGF_CA |
| pfam06247 | 460-626  | Plasmod_Pvs28 |
| pfam06247 | 1248-1399  | Plasmod_Pvs28 |
| pfam06247 | 1776-1921  | Plasmod_Pvs28 |
| pfam06247 | 1900-2050  | Plasmod_Pvs28 |
Ontology Information
| HPRD ID | 476 |    
|---|---|
| Molecular Class | Extracellular matrix protein |
| Molecular Function | Serine-type peptidase activity (GO:0008236) |
| Biological Process | Protein metabolism (GO:0019538)   |
Drug Information
No matching records could be found.
External Links
| ArrayExpress | GO |    
|---|---|
| ICGC | GO |    
| Cancer3D | GO |    
| COSMIC | GO |    
| NCG | GO |    
| TSGene | GO |    
| Tumor Gene Family of Databases | GO |    
| CCDB | GO |    
| G2SBC | GO |    
| Osteosarcoma Database | GO |    
| RCDB | GO |    
