Search results:
General Information
| Gene_Symbol | Gene_ID | Gene_Name | Chromosome | Alias |
|---|---|---|---|---|
| GBP1 | 2633 | Guanylate binding protein 1, interferon-inducible, 67kDa  | 1 | -  |
- Evidence
- Gene
- mRNA
- CDS
- Protein
- PTM
- Enzyme
- PPi
- Pathway
- Structural
- Domain
- Ontology
- SNP
- Drug
- External Links
Evidence Information
| Pubmed ID | Year | Sample Information | Techniques | Mechanism | Fold Change | Remark |
|---|---|---|---|---|---|---|
| 20454519    | 2010 | Cell line : - Source : - Sample Type : - No. of Sample : 388 Stage : - | Proliferation Assay, Soft Agar Assay,Western Blotting and Immunohistochemistry | Unknown | - | GBPs might be considered as potent members in an innate, IFN-gamma-induced antitumoral defense system. GBP-1 has been shown to exert antiangiogenic activities and was described as a prognostic marker in colorectal carcinomas. |
| 18697200    | 2008 | Cell line : - Source : Department of Pathology of Wrocaw Medical University. Sample Type : - No. of Sample : - Stage : - | Immunohistochemistry | Up-regulation | - | GBP-1 was strongly expressed in endothelial cells and immune cells in the desmoplastic stroma of 32% of CRC . |
| 22968445    | 2012 | Cell line : - Source : - Sample Type : - No. of Sample : - Stage : - | Laser capture microdissection,FFPE-FASP,SAX fractionation,LC-MSMS,Label-freequantitation. | Up-regulation | 3 | - |
Gene Details

| Gene Type | protein coding |
|---|---|
| Gene Family | - |
| Description | Guanylate binding protein expression is induced by interferon. Guanylate binding proteins are characterized by their ability to specifically bind guanine nucleotides (GMP, GDP, and GTP) and are distinguished from the GTP-binding proteins by the presence of 2 binding motifs rather than 3. [provided by RefSeq, Jul 2008]   |
| Chromosome | 1 |
| Location | 1p22.2 |
| Start | 89052304   |
| End | 89065360   |
| Strand | -   |
| Gene Sequence |    Download   Select all |
| Length | 13057   |
| OMIM ID | 600411    |
| HGNC ID | HGNC:4182    |
| Unigene ID | Hs.62661     |
| Ensembl ID | ENSG00000117228    |
| PharmGKB ID | -    |
mRNA Information
| mRNA ID | NM_002053.2 |
|---|---|
| Exon | join(1..201,2108..2316,5037..5164,5935..6044,6318..6520, 7127..7369,8227..8507,9133..9345,10146..10248, 10486..10679,11893..13057)   | mRNA Sequence |    Download   Select all |
| Length | 3050   |
CDS Information
| Location | join(2127..2316,5037..5164,5935..6044,6318..6520, 7127..7369,8227..8507,9133..9345,10146..10248, 10486..10679,11893..12006) |
|---|---|
| CDS Sequence |    Download   Select all |
| CCDS ID | CCDS718.1 |    
Protein Information
| Protein ID | NP_002044.2 |
|---|---|
| Protein Name | Guanylate binding protein 1, interferon-inducible, 67kDa |
| Molecular Wt. (Da) | 67800 |
| Protein Sequence |    Download   Select all |
| Length | 592   |
| Uniprot ID | O00238 |    
| Ensembl Protein ID | ENSP00000264568   |    
Post-translational Modification Information (Source : HPRD)
| Residue | Type | site |
|---|---|---|
| C | Prenylation | 589 |
Enzyme Information
No matching records could be found.
PPi Information
(Click to view network : Source STRING)      View   
No matching records from HPRD source could be found.
Pathway Information
No matching records could be found.
Structure Information
| PDB ID | 1DG3 |
|---|---|
| Resolution | 1.8 |
| Method | X-RAY DIFFRACTION |
| Chains | A   |
| Molecule | PROTEIN (INTERFERON-INDUCED GUANYLATE-BINDING PROTEIN 1)   |
| Model | View |
Domain Information
| ID | Location | Description |
|---|---|---|
| cd01851 | 32-276  | GBP |
| cl21455 | 32-276  | P-loop_NTPase superfamily |
| pfam02263 | 18-282  | GBP |
| cl22891 | 18-282  | GBP superfamily |
| cd00882 | 42-117  | Ras_like_GTPase |
| cd07648 | 436-559  | F-BAR_FCHO |
| cl12013 | 436-559  | BAR superfamily |
| pfam12203 | 478-559  | HDAC4_Gln |
| cl13614 | 478-559  | ClassIIa_HDAC_Gln-rich-N superfamily |
| cd10149 | 479-558  | ClassIIa_HDAC_Gln-rich-N |
| pfam05879 | 49-120  | RHD3 |
| cd10162 | 479-567  | ClassIIa_HDAC4_Gln-rich-N |
| TIGR01541 | 435-568  | tape_meas_lam_C |
| cl19901 | 435-568  | Tape_meas_lam_C superfamily |
| pfam02841 | 284-580  | GBP_C |
| COG0419 | 348-588  | SbcC |
| PTZ00121 | 381-577  | PTZ00121 |
| pfam12297 | 374-568  | EVC2_like |
| pfam04111 | 505-585  | APG6 |
| pfam09731 | 471-568  | Mitofilin |
| COG1842 | 437-583  | PspA |
| COG0419 | 321-592  | SbcC |
| PRK12704 | 434-591  | PRK12704 |
| COG5019 | 435-557  | CDC3 |
| PTZ00121 | 438-585  | PTZ00121 |
| TIGR03319 | 457-571  | RNase_Y |
| TIGR00618 | 445-579  | sbcc |
| pfam11600 | 457-582  | CAF-1_p150 |
| COG1196 | 438-585  | Smc |
| pfam09726 | 418-582  | Macoilin |
| COG4372 | 291-563  | COG4372 |
| COG4942 | 296-588  | EnvC |
| COG5394 | 371-554  | COG5394 |
| pfam07111 | 433-543  | HCR |
| TIGR02169 | 465-588  | SMC_prok_A |
| COG5185 | 416-587  | HEC1 |
| pfam12128 | 438-586  | DUF3584 |
| pfam11600 | 484-588  | CAF-1_p150 |
| PTZ00121 | 437-563  | PTZ00121 |
Ontology Information
| HPRD ID | 4457 |    
|---|---|
| Molecular Class | Enzyme: GTPase |
| Molecular Function | Receptor signaling protein serine/threonine kinase activity (GO:0004702) |
| Biological Process | Cell communication (GO:0007154); Signal transduction (GO:0007165)   |
Drug Information
No matching records could be found.
External Links
| ArrayExpress | GO |    
|---|---|
| ICGC | GO |    
| Cancer3D | GO |    
| COSMIC | GO |    
| NCG | GO |    
| TSGene | GO |    
| Tumor Gene Family of Databases | GO |    
| CCDB | GO |    
| G2SBC | GO |    
| Osteosarcoma Database | GO |    
| RCDB | GO |    
