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General Information
- Evidence
- Gene
- mRNA
- CDS
- Protein
- PTM
- Enzyme
- PPi
- Pathway
- Structural
- Domain
- Ontology
- SNP
- Drug
- External Links
Evidence Information
| Pubmed ID | Year | Sample Information | Techniques | Mechanism | Fold Change | Remark |
|---|---|---|---|---|---|---|
| 20812987 | 2010 | Cell line : - Source : Nanfang Hospital tumour tissue bank. Sample Type : CRC tumor and normal tissue No. of Sample : 150 Stage : - | 2-D Gel electrophoresis, and mass spectrometry,Western blotting , Immunohistochemistry | Down-regulation | - | This gene differentially expressed in between normal colorectal tissue and colorectal cancer tissue experiment done by 2-D Gel eclectrophotesis. |
Gene Details
| Gene Type | protein coding |
|---|---|
| Gene Family | - |
| Description | - |
| Chromosome | 3 |
| Location | 3q13.2 |
| Start | 111998739 |
| End | 112013888 |
| Strand | + |
| Gene Sequence | Download Select all |
| Length | 15150 |
| OMIM ID | 607953 |
| HGNC ID | HGNC:29868 |
| Unigene ID | Hs.169330 |
| Ensembl ID | ENSG00000144834 |
| PharmGKB ID | - |
mRNA Information
| mRNA ID | NM_013259.2 |
|---|---|
| Exon | join(1..376,509..864,2034..2208,13025..13127,14672..15150) | mRNA Sequence | Download Select all |
| Length | 1503 |
CDS Information
| Location | join(685..864,2034..2208,13025..13127,14672..14813) |
|---|---|
| CDS Sequence | Download Select all |
| CCDS ID | CCDS33816.1 |
Protein Information
| Protein ID | NP_001008273.1 |
|---|---|
| Protein Name | Transgelin 3 |
| Molecular Wt. (Da) | 22342 |
| Protein Sequence | Download Select all |
| Length | 199 |
| Uniprot ID | P23142 |
| Ensembl Protein ID | ENSP00000262722 |
Post-translational Modification Information (Source : HPRD)
No matching records could be found.
Enzyme Information
No matching records could be found.
PPi Information
(Click to view network : Source STRING) View
No matching records from HPRD source could be found.
Pathway Information
No matching records could be found.
Structure Information
No matching records could be found.
Domain Information
| ID | Location | Description |
|---|---|---|
| cd00014 | 25-133 | CH |
| cl00030 | 25-133 | CH superfamily |
| smart00033 | 28-132 | CH |
| pfam00307 | 27-132 | CH |
| pfam00402 | 174-198 | Calponin |
| cl02859 | 174-198 | Calponin superfamily |
| COG5199 | 14-188 | SCP1 |
| COG5261 | 33-140 | IQG1 |
Ontology Information
| HPRD ID | 416 |
|---|---|
| Molecular Class | Cytoskeletal associated protein |
| Molecular Function | Structural molecule activity (GO:0005198) |
| Biological Process | Cell growth and/or maintenance (GO:0008151) |
Drug Information
No matching records could be found.