Search results:


General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
HP 3240 Haptoglobin  16BP; HPA1S; HP2ALPHA2 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
20089989   2010Cell line : -

Source : VU University Medical Center, Amsterdam, The Netherlands.

Sample Type : CRC tumor and control tissue

No. of Sample : -

Stage : -

Biochemical isolation to nano-LC-MS/MS analysisUp-regulation6,2-

21150566   2011Cell line : -

Source : -

Sample Type : CRC tumor, control and Stool sample

No. of Sample : 190 participants (150 patients and 40 healthy individuals) and Stool sample

Stage : -

-Up-regulation-Fecal Hb-Hp complex, MPO, and sIgA can effectively be used as screening tools for the early diagnosis of colorectal cancer.

21953030   2012Cell line : -

Source : -

Sample Type : -

No. of Sample : -

Stage : -

ELISA Up-regulation-Clusterin (CLI) and haptoglobin (HP) are biomarkers condidate have the potential to discriminate accurately between control and cancer groups both individually and in combination with other proteins.

22006099   2012Cell line : -

Source : -

Sample Type : CRC tumor and control tissue

No. of Sample : 77

Stage : TNM Stag I-IV

-Up-regulation-Fuc-Hpt might be a useful marker for the prognosis of CRC.

The combination of Fuc-Hpt and CEA might be a better serologic marker to predict prognosis.

The relationship between Fuc-Hpt( Fucosylated Haptoglobin) levels and clinical parameters was investigated in 77 patients with CRC.

22219064   2012Cell line : -

Source : -

Sample Type : CRC tumor and control tissue

No. of Sample : 213

Stage : TNM Stag I-IV

Immunohistochemistry, cross-validation method and an independent test set.Up-regulation-Upregulated in colorectal cancer liver metastasis.


Gene Details



Chromosome: 16; NC_000016.9 (72088508..72094955)

View Larger Image
   
Gene Type protein coding
Gene Family -
Description This gene encodes a preproprotein, which is processed to yield both alpha and beta chains, which subsequently combine as a tetramer to produce haptoglobin. Haptoglobin functions to bind free plasma hemoglobin, which allows degradative enzymes to gain access to the hemoglobin, while at the same time preventing loss of iron through the kidneys and protecting the kidneys from damage by hemoglobin. Mutations in this gene and/or its regulatory regions cause ahaptoglobinemia or hypohaptoglobinemia. This gene has also been linked to diabetic nephropathy, the incidence of coronary artery disease in type 1 diabetes, Crohn's disease, inflammatory disease behavior, primary sclerosing cholangitis, susceptibility to idiopathic Parkinson's disease, and a reduced incidence of Plasmodium falciparum malaria. A similar duplicated gene is located next to this gene on chromosome 16. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]  
Chromosome 16
Location 16q22.2
Start 72054609  
End 72061056  
Strand +  
Gene Sequence

   Download   Select all

Length 6448  
OMIM ID 140100   
HGNC ID HGNC:5141   
Unigene ID Hs.513711   
Ensembl ID ENSG00000257017   
PharmGKB ID -   

mRNA Information


mRNA ID NM_005143.3
Exon join(1..49,1553..1635,1922..2023,2784..2858,3646..3747, 4506..4580,5504..6448)  
mRNA Sequence

   Download   Select all

Length 1461  



CDS Information


   
Location join(45..49,1553..1635,1922..2023,2784..2858,3646..3747, 4506..4580,5504..6282)
CDS Sequence

   Download   Select all

CCDS ID CCDS45524.1



Protein Information


      
Protein IDNP_001119574.1
Protein NameHaptoglobin
Molecular Wt. (Da)36596
Protein Sequence

   Download   Select all

Length 347  
Uniprot IDP42575
Ensembl Protein ID ENSP00000312664  



Post-translational Modification Information (Source : HPRD)


Residue Type site
NGlycosylation184
NGlycosylation207
NGlycosylation211
NGlycosylation241
RProteolytic Cleavage161

Enzyme Information


   
EC1.11.1.7
Nameperoxidase
lactoperoxidase
guaiacol peroxidase
plant peroxidase
Japanese radish peroxidase
horseradish peroxidase (HRP)
soybean peroxidase (SBP)
extensin peroxidase
heme peroxidase
oxyperoxidase
protoheme peroxidase
pyrocatechol peroxidase
scopoletin peroxidase
Coprinus cinereus peroxidase
Arthromyces ramosus peroxidase
ClassOxidoreductases; Acting on a peroxide as acceptor; Peroxidases
Sysnamephenolic donor:hydrogen-peroxide oxidoreductase  
Substratephenolic donor; H2O2  
Productphenoxyl radical of the donor; H2O  
Reaction (IUBMB)



PPi Information


(Click to view network : Source STRING)      View   

                              
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
933CD22114NP_001762.2in vivo11967116   
3684ITGAM411NP_000623.2in vivo11967116   


Pathway Information


No matching records could be found.

Structure Information


No matching records could be found.

Domain Information




ID Location Description
cd00190162-402  Tryp_SPc
cl21584162-402  Tryp_SPc superfamily
cd0003333-87  CCP
cl0004333-87  CCP superfamily
cd0003392-146  CCP
cl0004392-146  CCP superfamily
smart00020161-399  Tryp_SPc
pfam00089162-399  Trypsin


Ontology Information


   
HPRD ID2800
Molecular ClassTransport/cargo protein
Molecular FunctionCysteine-type peptidase activity (GO:0008234)
Biological ProcessApoptosis (GO:0006915)  



SNP Information


View SNP Geneview Report   

Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO