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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
HPGD 3248 Hydroxyprostaglandin dehydrogenase 15-(NAD)  4PGDH; PGDH1; PHOAR1; 15-PGDH; SDR36C1 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
15542609   2004Cell line : -

Source : Jackson Laboratory (Bar Harbor, ME), ATCC

Sample Type : -

No. of Sample : -

Stage : -

-Down-regulation-15-PGDH mRNA and protein levels are significantly reduced in human colorectal cancers relative to normal mucosa.

Loss of 15-PGDH function in vivo markedly decreases metabolic inactivation of PGE2.

24760190   2014Cell line : -

Source : -

Sample Type : CRC tumor and control tissue

No. of Sample : 270

Stage : TNM Stag I-IV

-Down-regulation-15-PGDH expression level in normal colon mucosa may serve as a biomarker that may predict stronger benefit from aspirin chemoprevention.

Hydroxyprostaglandin dehydrogenase 15-(nicotinamide adenine dinucleotide) (15-PGDH, HPGD) is down-regulated in colorectal cancers and functions as a metabolic antagonist of PTGS2.

23960441   2013Cell line : -

Source : Asan Medical Center (Seoul, Korea)

Sample Type : CRC tumor and control tissue

No. of Sample : 32

Stage : -

real time RT-PCRDown-regulation-15-PGDH in normal-appearing colorectal mucosa can be a useful biomarker of field effect for the prediction of sporadic synchronous neoplasms.


Gene Details



Chromosome: 4; NC_000004.11 (175411328..175444049, complement)

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Gene Type protein coding
Gene Family Short chain dehydrogenase/reductase superfamily / Classical SDR fold cluster 1
Description This gene encodes a member of the short-chain nonmetalloenzyme alcohol dehydrogenase protein family. The encoded enzyme is responsible for the metabolism of prostaglandins, which function in a variety of physiologic and cellular processes such as inflammation. Mutations in this gene result in primary autosomal recessive hypertrophic osteoarthropathy and cranioosteoarthropathy. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Mar 2009]  
Chromosome 4
Location 4q34-q35
Start 174490177  
End 174522898  
Strand -  
Gene Sequence

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Length 32722  
OMIM ID 601688   
HGNC ID HGNC:5154   
Unigene ID Hs.596913   
Ensembl ID ENSG00000164120   
PharmGKB ID -   

mRNA Information


mRNA ID NM_001256306.1
Exon join(1..540,832..955,27275..27351,29585..29748, 30805..32722)  
mRNA Sequence

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Length 2840  



CDS Information


   
Location join(448..540,832..955,27275..27351,29585..29748, 30805..30943)
CDS Sequence

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CCDS ID CCDS58934.1



Protein Information


      
Protein IDNP_000851.2
Protein NameHydroxyprostaglandin dehydrogenase 15-(NAD)
Molecular Wt. (Da)28846
Protein Sequence

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Length 266  
Uniprot IDP42574
Ensembl Protein ID ENSP00000311032  



Post-translational Modification Information (Source : HPRD)


No matching records could be found.

Enzyme Information


   
EC1.1.1.141
Name15-hydroxyprostaglandin dehydrogenase (NAD+)
NAD+-dependent 15-hydroxyprostaglandin dehydrogenase (type I)
PGDH
11alpha,15-dihydroxy-9-oxoprost-13-enoate:NAD+ 15-oxidoreductase
15-OH-PGDH
15-hydroxyprostaglandin dehydrogenase
15-hydroxyprostanoic dehydrogenase
NAD+-specific 15-hydroxyprostaglandin dehydrogenase
prostaglandin dehydrogenase
15-hydroxyprostaglandin dehydrogenase (NAD+)
(5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate:NAD+ 15-oxidoreductase
ClassOxidoreductases; Acting on the CH-OH group of donors; With NAD+ or NADP+ as acceptor
Sysname(5Z,13E,15S)-11alpha,15-dihydroxy-9-oxoprost-5,13-dienoate:NAD+ 15-oxidoreductase  
Substrate(5Z,13E,15S)-11alpha,15-dihydroxy-9-oxoprost-5,13-dienoate; NAD+  
Product(5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-5,13-dienoate; NADH; H+  
Reaction (IUBMB)



PPi Information


(Click to view network : Source STRING)      View   

No matching records from HPRD source could be found.

Pathway Information


      
Pathway Name Pathway ID
Transcriptional misregulation in cancer hsa05202


Structure Information


PDB ID2GDZ
Resolution1.65
MethodX-RAY DIFFRACTION
Chains A  
Molecule NAD+-dependent 15-hydroxyprostaglandin dehydrogenase  
Model View



Domain Information




ID Location Description
cd053236-254  ADH_SDR_c_like
cl214546-254  NADB_Rossmann superfamily
cd052338-246  SDR_c
cd053413-241  3beta-17beta-HSD_like_SDR_c
cd053336-237  BKR_SDR_c
cd089404-192  HBDH_SDR_c
cd053664-198  meso-BDH-like_SDR_c
cd053475-210  Ga5DH-like_SDR_c
cd053644-214  SDR_c11
cd053714-193  HSD10-like_SDR_c
cd053525-238  MDH-like_SDR_c
cd053306-245  cyclohexanol_reductase_SDR_c
cd053585-237  GlcDH_SDR_c
cd089326-208  HetN_like_SDR_c
PRK129353-237  PRK12935
cd053445-188  BKR_like_SDR_like
cd053265-191  secoisolariciresinol-DH_like_SDR_c
cd053633-195  SDH_SDR_c
cd053746-215  17beta-HSD-like_SDR_c
cd089345-202  CAD_SDR_c
cd053685-215  DHRS6_like_SDR_c
cd089443-193  SDR_c12
cd053451-245  BKR_3_SDR_c
cd089296-188  SDR_c4
PRK070698-194  PRK07069
cd053323-190  11beta-HSD1_like_SDR_c
cd089335-196  RDH_SDR_c
cd053555-203  SDR_c1
cd053246-208  carb_red_PTCR-like_SDR_c
cd053695-184  TER_DECR_SDR_a
cd053295-205  TR_SDR_c
cd053624-201  THN_reductase-like_SDR_c
cd089395-188  KDSR-like_SDR_c
cd053397-195  17beta-HSDXI-like_SDR_c
cd053607-188  SDR_c3
cd053598-199  ChcA_like_SDR_c
cd089304-184  SDR_c8
PRK065505-189  fabG
cd053435-192  Mgc4172-like_SDR_c
cd089354-189  mannonate_red_SDR_c
cd053576-245  PR_SDR_c
cd089316-200  SDR_c9
cd089456-194  PKR_SDR_c
cd053466-188  SDR_c5
cd097615-237  A3DFK9-like_SDR_c
cd053657-232  7_alpha_HSDH_SDR_c
cd053384-184  DHRS1_HSDL2-like_SDR_c
cd053508-194  SDR_c6
cd053275-191  retinol-DH_like_SDR_c_like
cd053701-193  SDR_c2
PRK078326-195  PRK07832
cd053677-243  SPR-like_SDR_c
cd089435-183  R1PA_ADH_SDR_c
cd053533-198  hydroxyacyl-CoA-like_DH_SDR_c-like
cd053318-237  DH-DHB-DH_SDR_c
cd053565-190  17beta-HSD1_like_SDR_c
cd053377-197  BKR_1_SDR_c
PRK097306-190  PRK09730
cd089423-208  RhlG_SDR_c
cd053484-188  BphB-like_SDR_c
cd089365-200  CR_SDR_c
PRK069476-190  PRK06947
cd053496-188  BKR_2_SDR_c
cd089375-188  DHB_DH-like_SDR_c
cd053515-188  XR_like_SDR_c
PRK061236-190  PRK06123
cd053225-184  SDH_SDR_c_like
cd053289-245  3alpha_HSD_SDR_c
cd053543-198  SDR_c7
PRK069246-245  PRK06924
cd097634-198  DHRS1-like_SDR_c
cd098075-188  retinol-DH_like_SDR_c
PRK075235-188  PRK07523
cd053403-199  Ycik_SDR_c
PRK080855-194  PRK08085
cd098066-212  type1_17beta-HSD-like_SDR_c
PRK064824-166  PRK06482
PRK128595-188  PRK12859
PRK058765-196  PRK05876
cd053345-188  DHPR_SDR_c_like
cd098056-200  type2_17beta_HSD-like_SDR_c
cd053258-188  carb_red_sniffer_like_SDR_c
PRK082516-190  PRK08251
cd097624-190  HSDL2_SDR_c
cd117318-190  Lin1944_like_SDR_c
PRK070238-194  PRK07023
pfam1356112-203  adh_short_C2
PRK089454-189  PRK08945
cd053617-188  haloalcohol_DH_SDR_c-like
TIGR015007-236  sepiapter_red
cd053725-181  ENR_SDR
cd08953May-98  KR_2_SDR_x
PRK127473-203  PRK12747
cd022668-193  SDR
PRK1242854-191  PRK12428
PRK127462-190  PRK12746
cd098085-117  DHRS-12_like_SDR_c-like
PRK07806Feb-92  PRK07806
PRK075335-188  PRK07533
PRK06720Jan-94  PRK06720
PRK079049-188  PRK07904
PRK08340Sep-93  PRK08340
cd053737-226  SDR_c10
cd089519-188  DR_C-13_KR_SDR_c_like
smart008226-153  PKS_KR
PRK087035-188  PRK08703
PRK080176-188  PRK08017
cd117308-188  Tthb094_like_SDR_c
PRK084162-193  PRK08416
pfam08659Sep-94  KR
PRK0757861-196  PRK07578
PRK083393-197  PRK08339
cd09810Jun-94  LPOR_like_SDR_c_like
cd05247Sep-82  UDP_G4E_1_SDR_e
PRK064839-186  PRK06483
PRK08303May-91  PRK08303
cd098095-107  human_WWOX_like_SDR_c-like
PRK061017-188  PRK06101
PRK05854May-94  PRK05854
PRK059936-196  PRK05993
PRK088621-189  PRK08862
PRK123674-110  PRK12367
PRK060791-188  PRK06079
cd05274Sep-94  KR_FAS_SDR_x
PRK07453Aug-94  PRK07453
cd052381-227  Gne_like_SDR_e
PRK084151-188  PRK08415
cd05226Aug-98  SDR_e_a
cd089416-102  3KS_SDR_c
PRK081776-188  PRK08177
cd08950May-32  KR_fFAS_SDR_c_like
cd05253Sep-94  UDP_GE_SDE_e
cd05256Sep-78  UDP_AE_SDR_e
PRK0710297-188  PRK07102
cd052716-100  NDUFA9_like_SDR_a
cd052375-109  UDP_invert_4-6DH_SDR_e
PRK055651-245  fabG
PRK056531-214  fabG
COG10281-198  FabG
PRK124293-188  PRK12429
PRK072311-193  fabG
PRK055571-194  fabG
PRK128265-188  PRK12826
TIGR039713-237  SDR_subfam_1
PRK128295-210  PRK12829
PRK068414-190  PRK06841
PRK070671-188  PRK07067
PRK078253-188  PRK07825
PRK128251-198  fabG
PRK073261-188  PRK07326
COG03001-190  DltE
PRK086434-206  PRK08643
TIGR018308-202  3oxo_ACP_reduc
PRK061721-192  PRK06172
PRK070635-193  PRK07063
TIGR019635-192  PHB_DH
COG42211-203  YdfG
PRK082654-194  PRK08265
PRK067015-203  PRK06701
PRK128246-245  PRK12824
PRK060575-192  PRK06057
TIGR024156-198  23BDH
PRK058555-193  PRK05855
PRK061713-201  PRK06171
PRK064631-245  fabG
PRK129394-205  PRK12939
PRK061381-194  PRK06138
PRK078315-198  PRK07831
PRK061815-190  PRK06181
PRK128275-192  PRK12827
PRK133943-192  PRK13394
pfam001066-168  adh_short
PRK064845-197  PRK06484
PRK064845-245  PRK06484
PRK074546-193  PRK07454
PRK082265-199  PRK08226
PRK069354-204  PRK06935
PRK092424-205  PRK09242
PRK082135-197  PRK08213
PRK082171-200  fabG
PRK082773-185  PRK08277
TIGR018296-197  AcAcCoA_reduct
PRK060771-245  fabG
PRK061945-193  PRK06194
PRK070355-188  PRK07035
PRK089364-237  PRK08936
PRK077741-189  PRK07774
PRK128281-188  PRK12828
PRK071093-188  PRK07109
PRK082679-193  PRK08267
PLN022535-190  PLN02253
PRK076661-188  fabG
PRK063985-222  PRK06398
PRK056509-193  PRK05650
PRK061794-188  PRK06179
PRK123845-184  PRK12384
PRK061245-188  PRK06124
PRK061131-203  PRK06113
TIGR018324-204  kduD
PRK083245-183  PRK08324
PRK069144-254  PRK06914
PRK078564-188  PRK07856
PRK077923-183  fabG
PRK082201-199  PRK08220
PRK070601-188  PRK07060
TIGR045045-192  SDR_subfam_2
PRK085893-202  PRK08589
PRK070746-188  PRK07074
PRK061982-188  PRK06198
PRK057174-188  PRK05717
PRK129371-202  PRK12937
PRK061143-188  PRK06114
PRK082634-184  PRK08263
PRK080635-208  PRK08063
PRK082615-188  fabG
PRK086281-188  PRK08628
PRK058723-189  PRK05872
PRK061804-184  PRK06180
PRK070623-189  PRK07062
TIGR043168-202  dhbA_paeA
TIGR032063-197  benzo_BadH
PRK074781-190  PRK07478
TIGR026325-252  RhaD_aldol-ADH
PRK127436-188  PRK12743
PRK091351-184  PRK09135
PRK127456-188  PRK12745
COG39671-201  DltE
PRK091864-184  PRK09186
PRK069495-190  PRK06949
PRK129363-201  PRK12936
PRK128235-184  benD
PRK124813-204  PRK12481
PRK078143-205  PRK07814
PRK077913-183  PRK07791
TIGR033251-188  BphB_TodD
PRK065234-197  PRK06523
PRK058673-194  PRK05867
PRK062001-188  PRK06200
PRK061391-188  PRK06139
PRK089935-204  PRK08993
PRK065005-188  PRK06500
PRK129386-197  PRK12938
PRK082641-188  PRK08264
PRK127481-188  PRK12748
PRK072013-166  PRK07201
PRK061285-207  PRK06128
PRK090721-190  PRK09072
PRK070975-189  PRK07097
TIGR026857-184  pter_reduc_Leis
PRK086421-188  fabG
PRK082196-198  PRK08219
TIGR018319-197  fabG_rel
PRK076775-184  PRK07677
PRK061251-203  PRK06125
PRK075776-188  PRK07577
PRK079853-190  PRK07985
PRK061826-227  PRK06182
PRK075764-186  PRK07576
PRK105387-186  PRK10538
PRK082781-183  PRK08278
PRK06197May-94  PRK06197
PRK078905-186  PRK07890
PRK056936-188  PRK05693
PRK127425-188  PRK12742
PRK058759-194  PRK05875
PRK058663-176  PRK05866
PRK06196May-94  PRK06196
PRK091346-184  PRK09134
PRK0702410-188  PRK07024
PRK057861-186  fabG
COG06234-188  FabI
PRK073705-200  PRK07370
PRK127441-188  PRK12744
PRK092915-188  PRK09291
PRK07424May-95  PRK07424
PLN027805-188  PLN02780
PRK070419-198  PRK07041
PRK081595-188  PRK08159
COG04519-109  WcaG
COG1087Sep-82  GalE
pfam013708-126  Epimerase


Ontology Information


   
HPRD ID2799
Molecular ClassEnzyme: Dehydrogenase
Molecular FunctionCysteine-type peptidase activity (GO:0008234)
Biological ProcessApoptosis (GO:0006915)  



SNP Information


View SNP Geneview Report   

Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO