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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
BIRC5 332 baculoviral IAP repeat containing 5  17EPR-1, survivin 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
24338523   2014Cell line : -

Source : -

Sample Type : Blood samples

No. of Sample : 92 CRC patients and 60 healthy volunteers

Stage : TNM Stage I-IV

real time RT- PCRUp-regulation-Serum cell free BIRC5 mRNA is a promising non-invasive biomarker for diagnosis and prognosis of CRC.

Cell free BIRC5 mRNA levels were significantly increased in serum of CRC (P <0.001), and significantly correlated with tumor differentiation (P=0.035), regional lymph node metastasis (P <0.001) and TNM stage (P< 0.001).

23405201   2013Cell line : -

Source : Tsuchiya General Hospital in Hiroshima.

Sample Type : CRC tumor and Normal tissue

No. of Sample : 40

Stage : TNM Stage I-IV

Immunoblotting, Indirect immunofluorescence, ImmunoprecipitationUp-regulation-The detergent soluble cytoplasmic Survivin might be a promising predictive biomarker for lymph node and distant metastases of colorectal cancer.

An anti-apoptotic function of detergent-soluble Survivin in interphase cells experiencing anoikis is mediated at least via XIAP/IB-/NF-Kappa B signaling.


Gene Details



Chromosome 17 - NC_000017.11 (78214196..78225635)

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Gene Type protein coding
Gene Family Baculoviral IAP repeat containing
Description This gene is a member of the inhibitor of apoptosis (IAP) gene family, which encode negative regulatory proteins that prevent apoptotic cell death. IAP family members usually contain multiple baculovirus IAP repeat (BIR) domains, but this gene encodes proteins with only a single BIR domain. The encoded proteins also lack a C-terminus RING finger domain. Gene expression is high during fetal development and in most tumors, yet low in adult tissues. Alternatively spliced transcript variants encoding distinct isoforms have been found for this gene.  
Chromosome 17
Location 17q25.3
Start 78214196  
End 78225635  
Strand +  
Gene Sequence

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Length 11440  
OMIM ID 603352   
HGNC ID HGNC:593   
Unigene ID Hs.744872   
Ensembl ID ENSG00000089685   
PharmGKB ID -   

mRNA Information


mRNA ID NM_001012271.1
Exon join(1..232,485..594,1771..1839,2469..2586,9270..11440)  
mRNA Sequence

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Length 2537  



CDS Information


   
Location join(122..232,485..594,9270..9462)
CDS Sequence

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CCDS ID CCDS32751.1



Protein Information


      
Protein IDNP_001012271.1
Protein Namebaculoviral IAP repeat containing 5
Molecular Wt. (Da)18506
Protein Sequence

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Length 165  
Uniprot IDP01241
Ensembl Protein ID ENSP00000312673  



Post-translational Modification Information (Source : HPRD)


Residue Type site
TPhosphorylation34
TPhosphorylation34
TPhosphorylation34

Enzyme Information


No matching records could be found.

PPi Information


No STRING Network could be found.

                                                                                          
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
836CASP32799NP_004337.2in vitro9850056   
840CASP73457NP_203124.1in vitro11   170   436   985   005   600   000   000   
842CASP93756NP_001220.2in vivo11069302   
1019CDK4447NP_000066.1in vitro10713676   
5921RASA1745NP_002881.1in vivo11976319   
7514XPO13975NP_003391.1in vitro17099693   


Pathway Information


                        
Pathway Name Pathway ID
Colorectal cancer hsa05210
Hepatitis B hsa05161
Hippo signaling pathway hsa04390
Pathways in cancer hsa05200


Structure Information


No matching records could be found.

Domain Information




ID Location Description
cd0002216-87  BIR
cl0003516-87  BIR superfamily
smart0023814-87  BIR
pfam0065318-87  BIR


Ontology Information


   
HPRD ID1996
Molecular ClassAdapter molecule
Molecular FunctionCarboxy-lyase activity (GO:0016831)
Biological ProcessMetabolism (GO:0008152); Energy pathways (GO:0006091)  



SNP Information


View SNP Geneview Report   

Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO