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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
HSP90AB1 3326 Heat shock protein 90kDa alpha (cytosolic), class B member 1  6HSP84; HSPC2; HSPCB; D6S182; HSP90B 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
20812987   2010Cell line : -

Source : Nanfang Hospital tumour tissue bank.

Sample Type : CRC tumor and control tissue

No. of Sample : 151

Stage : -

2-D Gel electrophoresis, and mass spectrometry,Western blotting, ImmunohistochemistryUp-regulation-This gene differentially expressed in between normal colorectal tissue and colorectal cancer tissue experiment done by 2-D Gel eclectrophotesis

In total, 150 patients were involved in the study.


Gene Details



Chromosome: 6; NC_000006.11 (44214849..44221614)

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Gene Type protein coding
Gene Family Heat shock proteins / HSPC
Description This gene encodes a member of the heat shock protein 90 family; these proteins are involved in signal transduction, protein folding and degradation and morphological evolution. This gene encodes the constitutive form of the cytosolic 90 kDa heat-shock protein and is thought to play a role in gastric apoptosis and inflammation. Alternative splicing results in multiple transcript variants. Pseudogenes have been identified on multiple chromosomes. [provided by RefSeq, Dec 2012]  
Chromosome 6
Location 6p12
Start 44246166  
End 44253888  
Strand +  
Gene Sequence

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Length 7723  
OMIM ID 140572   
HGNC ID HGNC:5258   
Unigene ID Hs.509736   
Ensembl ID ENSG00000096384   
PharmGKB ID -   

mRNA Information


mRNA ID NM_001271970.1
Exon join(1..179,2465..2611,3212..3418,3510..3669,3856..3989, 4126..4434,4883..5048,5253..5443,5572..5719,5834..6102, 6880..7213,7324..7723)  
mRNA Sequence

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Length 2703  



CDS Information


   
Location join(2465..2611,3212..3418,3510..3669,3856..3989, 4126..4434,4883..5048,5253..5443,5572..5719,5834..6102, 6880..7213,7324..7433)
CDS Sequence

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CCDS ID CCDS4909.1



Protein Information


      
Protein IDNP_001258898.1
Protein NameHeat shock protein 90kDa alpha (cytosolic), class B member 1
Molecular Wt. (Da)83133
Protein Sequence

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Length 724  
Uniprot IDQ92851
Ensembl Protein ID ENSP00000272879  



Post-translational Modification Information (Source : HPRD)


Residue Type site
SPhosphorylation255
SPhosphorylation261
YPhosphorylation484;-
YPhosphorylation484;-
SPhosphorylation226;-
SPhosphorylation255;-
TPhosphorylation297;-
YPhosphorylation484;-
SPhosphorylation307
SPhosphorylation452
SPhosphorylation532
SPhosphorylation718
KAcetylation568
KAcetylation435
KAcetylation481
SPhosphorylation445
YPhosphorylation596
TPhosphorylation60
TPhosphorylation285
TPhosphorylation309
SPhosphorylation535
TPhosphorylation514

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                                                                                                         
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
207AKT11261NP_005154.2in vivo10995457   
392ARHGAP14108NP_004299.1yeast 2-hybrid14697242   
2099ESR1589NP_000116.2in vitro11795466   
6774STAT326NP_644805.1in vivo12559950   
7157TP531859NP_000537.3in vitro;in vivo11707401   
8976WASL5448NP_003932.3in vitro;in vivo15791211   
57062DDX245860NP_065147.1yeast 2-hybrid16169070   


Pathway Information


                                                
Pathway Name Pathway ID
Antigen processing and presentation hsa04612
Estrogen signaling pathway hsa04915
NOD-like receptor signaling pathway hsa04621
Pathways in cancer hsa05200
PI3K-Akt signaling pathway hsa04151
Progesterone-mediated oocyte maturation hsa04914
Prostate cancer hsa05215
Protein processing in endoplasmic reticulum hsa04141


Structure Information


PDB ID1QZ2
Resolution3
MethodX-RAY DIFFRACTION
Chains A  
Molecule FK506-binding protein 4  
Model View



Domain Information




ID Location Description
cd0007537-185  HATPase_c
cl0007537-185  HATPase_c superfamily
pfam00183191-724  HSP90
cl20204191-724  HSP90 superfamily
pfam0251835-188  HATPase_c
smart0038735-186  HATPase_c
pfam1358933-153  HATPase_c_3
PTZ0027214-724  PTZ00272
PRK0521814-689  PRK05218
COG032614-688  HtpG
PTZ0013017-693  PTZ00130
PRK1408316-408  PRK14083


Ontology Information


   
HPRD ID282
Molecular ClassChaperone
Molecular FunctionOxidoreductase activity (GO:0016491)
Biological ProcessMetabolism (GO:0008152); Energy pathways (GO:0006091)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO