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General Information
- Evidence
- Gene
- mRNA
- CDS
- Protein
- PTM
- Enzyme
- PPi
- Pathway
- Structural
- Domain
- Ontology
- SNP
- Drug
- External Links
Evidence Information
| Pubmed ID | Year | Sample Information | Techniques | Mechanism | Fold Change | Remark |
|---|---|---|---|---|---|---|
| 22968445 | 2012 | Cell line : - Source : Department of Pathology of Wrocaw Medical University. Sample Type : CRC tumor and normal tissue No. of Sample : 8 Stage : - | Laser capture microdissection,FFPE-FASP,SAX fractionation,LC-MSMS,Label-free quantitation. | Up-regulation | - | A list of genes including this gene are differentially expressed analysed by LC-MS/MS technique. To compare the proteomes of colonic mucosa (normal or N) and colon cancer (cancer or C), we analyzed archival FFPE clinical samples originating from eight patients. |
Gene Details
| Gene Type | protein coding |
|---|---|
| Gene Family | - |
| Description | - |
| Chromosome | 19 |
| Location | 19p13.12 |
| Start | 14053367 |
| End | 14062111 |
| Strand | - |
| Gene Sequence | Download Select all |
| Length | 8745 |
| OMIM ID | |
| HGNC ID | HGNC:33274 |
| Unigene ID | Hs.444298 |
| Ensembl ID | ENSG00000187867 |
| PharmGKB ID | - |
mRNA Information
| mRNA ID | XM_005259891.3 |
|---|---|
| Exon | join(1..172,2949..2997,4681..4761,5308..5450,5599..5683, 6687..6732,6886..8745) | mRNA Sequence | Download Select all |
| Length | 2436 |
CDS Information
| Location | join(132..172,2949..2997,5308..5450,5599..5683,6687..6732, 6886..8507) |
|---|---|
| CDS Sequence | Download Select all |
| CCDS ID | - |
Protein Information
| Protein ID | NP_001138500.1 |
|---|---|
| Protein Name | Hypothetical LOC342979 |
| Molecular Wt. (Da) | 71565 |
| Protein Sequence | Download Select all |
| Length | 673 |
| Uniprot ID | P34059 |
| Ensembl Protein ID | ENSP00000268695 |
Post-translational Modification Information (Source : HPRD)
No matching records could be found.
Enzyme Information
No matching records could be found.
PPi Information
(Click to view network : Source STRING) View
No matching records from HPRD source could be found.
Pathway Information
No matching records could be found.
Structure Information
No matching records could be found.
Domain Information
| ID | Location | Description |
|---|---|---|
| PRK10905 | 556-659 | PRK10905 |
| TIGR00927 | 371-563 | 2A1904 |
| TIGR00927 | 370-582 | 2A1904 |
| PHA03269 | 525-655 | PHA03269 |
| PRK07764 | 558-665 | PRK07764 |
| TIGR00927 | 362-579 | 2A1904 |
Ontology Information
| HPRD ID | 8994 |
|---|---|
| Molecular Class | Unclassified |
| Molecular Function | Transcription factor activity (GO:0003700) |
| Biological Process | Regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism (GO:0019219) |
Drug Information
No matching records could be found.