Search results:


General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
IFNAR1 3454 interferon (alpha, beta and omega) receptor 1  21IFRC 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
21716316   2011Cell line : -

Source : Hospitals located in the South East region of Norway.

Sample Type : CRC tumor and normal tissues

No. of Sample : 24

Stage : TNM Stage I-IV

-Down-regulation-CLC and IFNAR1 were identified to be overall differentially expressed between early- and late-onset CRC, and are important in the development of early-onset CRC.


Gene Details



NC_000021.8 (34696748..34732129)

View Larger Image
   
Gene Type protein coding
Gene Family Interferons
Description The protein encoded by this gene is a type I membrane protein that forms one of the two chains of a receptor for interferons alpha and beta. Binding and activation of the receptor stimulates Janus protein kinases, which in turn phosphorylate several proteins, including STAT1 and STAT2. The encoded protein also functions as an antiviral factor. [provided by RefSeq, Jul 2008]  
Chromosome 21
Location 21q22.1
Start 34696748  
End 34732129  
Strand +  
Gene Sequence

   Download   Select all

Length 35382  
OMIM ID 107450   
HGNC ID HGNC:5432   
Unigene ID Hs.529400   
Ensembl ID ENSG00000142166   
PharmGKB ID PA29670   

mRNA Information


mRNA ID XM_005260964.1
Exon join(1..196,11082..11205,16557..16732,18826..18980, 19093..19234,20804..20918,24649..24848,24947..25101, 28316..28466,29196..29341,30874..35377)  
mRNA Sequence

   Download   Select all

Length 6064  



CDS Information


   
Location328..1794
CDS Sequence

   Download   Select all

CCDS ID CCDS13624.1



Protein Information


      
Protein IDXP_005261021.1
Protein Nameinterferon (alpha, beta and omega) receptor 1
Molecular Wt. (Da)55915
Protein Sequence

   Download   Select all

Length 488  
Uniprot IDP04278
Ensembl Protein ID ENSP00000369816  



Post-translational Modification Information (Source : HPRD)


Residue Type site
YPhosphorylation466
YPhosphorylation481
SPhosphorylation495
SPhosphorylation535
SPhosphorylation539
TPhosphorylation494
NGlycosylation58
NGlycosylation110
NGlycosylation313
NGlycosylation314

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                                                                                                         
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
3439IFNA1974NP_076918.1in vitro7932753   
3455IFNAR23850NP_997468.1in vitro15389589   
3932LCK1080NP_005347.3in vitro;in vivo9403695   
5788PTPRC1050NP_002829.2in vitro;in vivo9403695   
6774STAT326NP_644805.1in vivo8626489   
7535ZAP701495NP_001070.2in vitro;in vivo9403695   
23291FBXW117294NP_036432.2in vitro;in vivo14532120   


Pathway Information


                                                                  
Pathway Name Pathway ID
Cytokine-cytokine receptor interaction hsa04060
Hepatitis B hsa05161
Hepatitis C hsa05160
Herpes simplex infection hsa05168
Influenza A hsa05164
Jak-STAT signaling pathway hsa04630
Measles hsa05162
Natural killer cell mediated cytotoxicity hsa04650
Osteoclast differentiation hsa04380
PI3K-Akt signaling pathway hsa04151
Toll-like receptor signaling pathway hsa04620


Structure Information


No matching records could be found.

Domain Information




ID Location Description
pfam09294126-220  Interfer-bind
cl21522126-220  FN3 superfamily
pfam09294330-426  Interfer-bind
cl21522330-426  FN3 superfamily
pfam0110811-114  Tissue_fac
cl2152211-114  FN3 superfamily
pfam01108220-318  Tissue_fac
cl21522220-318  FN3 superfamily


Ontology Information


   
HPRD ID2780
Molecular ClassCytokine receptor
Molecular FunctionProtein binding (GO:0005515)
Biological ProcessSignal transduction (GO:0007165); Cell communication (GO:0007154)  



SNP Information


View SNP Geneview Report   

Drug Information


Uniprot ID DrugBank ID Name Type
P17181DB00008Peginterferon alfa-2aBiotechDrug
P17181DB00011Interferon alfa-n1BiotechDrug
P17181DB00018Interferon alfa-n3BiotechDrug
P17181DB00022Peginterferon alfa-2bBiotechDrug
P17181DB00034Interferon Alfa-2a, RecombinantBiotechDrug
P17181DB00060Interferon beta-1aBiotechDrug
P17181DB00068Interferon beta-1bBiotechDrug
P17181DB00069Interferon alfacon-1BiotechDrug
P17181DB00105Interferon Alfa-2b, RecombinantBiotechDrug
P17181DB05258Natural alpha interferonBiotechDrug

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO