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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
KPNA2 3838 Karyopherin alpha 2 (RAG cohort 1, importin alpha 1)  17QIP2; RCH1; IPOA1; SRP1alpha 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
22968445   2012Cell line : -

Source : Department of Pathology of Wrocaw Medical University.

Sample Type : -

No. of Sample : -

Stage : -

Laser capture microdissection,FFPE-FASP,SAX fractionation,LC-MSMS,Label-free quantitation.Up-regulation--


Gene Details



Chromosome: 17; NC_000017.10 (66031848..66042970)

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Gene Type protein coding
Gene Family Importins, Armadillo repeat containing
Description The import of proteins into the nucleus is a process that involves at least 2 steps. The first is an energy-independent docking of the protein to the nuclear envelope and the second is an energy-dependent translocation through the nuclear pore complex. Imported proteins require a nuclear localization sequence (NLS) which generally consists of a short region of basic amino acids or 2 such regions spaced about 10 amino acids apart. Proteins involved in the first step of nuclear import have been identified in different systems. These include the Xenopus protein importin and its yeast homolog, SRP1 (a suppressor of certain temperature-sensitive mutations of RNA polymerase I in Saccharomyces cerevisiae), which bind to the NLS. KPNA2 protein interacts with the NLSs of DNA helicase Q1 and SV40 T antigen and may be involved in the nuclear transport of proteins. KPNA2 also may play a role in V(D)J recombination [provided by RefSeq, Jul 2008]  
Chromosome 17
Location 17q24.2
Start 68035732  
End 68046854  
Strand +  
Gene Sequence

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Length 11123  
OMIM ID 600685   
HGNC ID HGNC:6395   
Unigene ID Hs.594238    
Ensembl ID ENSG00000182481   
PharmGKB ID -   

mRNA Information


mRNA ID NM_002266.2
Exon join(1..109,1379..1476,1627..1764,4947..5035,6354..6622, 7174..7268,7369..7632,8107..8340,8590..8772,10041..10190, 10773..11123)  
mRNA Sequence

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Length 2011  



CDS Information


   
Locationjoin(1402..1476,1627..1764,4947..5035,6354..6622, 7174..7268,7369..7632,8107..8340,8590..8772,10041..10190, 10773..10865)
CDS Sequence

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CCDS ID CCDS32713.1



Protein Information


      
Protein IDNP_002257.1
Protein NameKaryopherin alpha 2 (RAG cohort 1, importin alpha 1)
Molecular Wt. (Da)57731
Protein Sequence

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Length 529  
Uniprot IDP33681
Ensembl Protein ID ENSP00000264246  



Post-translational Modification Information (Source : HPRD)


Residue Type site
KAcetylation22
SPhosphorylation62
KAcetylation22
SPhosphorylation62;-
SPhosphorylation24;-
TPhosphorylation61;-
SPhosphorylation55;-
SPhosphorylation490
TPhosphorylation349
TPhosphorylation358
TPhosphorylation363
TPhosphorylation3
SAcetylation2
SPhosphorylation54
TPhosphorylation73
TPhosphorylation311
SPhosphorylation2

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                                                                                                                                                                                                                                                                                                                           
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
339APOBEC12531NP_001635.2yeast 2-hybrid12881431   
672BRCA1218NP_009231.2in vitro;yeast 2-hybrid9497340   
835CASP22800NP_116764.2in vitro12477715   
1452CSNK1A12739NP_001020276.1in vitro12062430   
2035EPB41558AAD42222.1in vitro10359596   
2908NR3C1679NP_001019265.1in vivo12933681   
3005H1F0819NP_005309.1in vitro10228156   
3702ITK1746NP_005537.3in vitro;in vivo11581171   
4793NFKBIB7260NP_002494.2in vitro14743216   
5079PAX51334NP_057953.1in vitro;yeast 2-hybrid10748034   
5757PTMA1778NP_001092755.1in vitro11310559   
5896RAG11556NP_000439.1yeast 2-hybrid8016130   
5965RECQL2762NP_002898.2in vitro;yeast 2-hybrid9168958   
5970RELA1241NP_068810.3in vitro12504098   
5971RELB6886NP_006500.2in vitro;in vivo14743216   
6514SLC2A2685NP_000331.1in vitro;in vivo;yeast 2-hybrid11988093   
7157TP531859NP_000537.3in vitro;in vivo;yeast 2-hybrid10930427   
10628TXNIP5964NP_006463.3in vitro;yeast 2-hybrid15234975   
28986MAGEH16633NP_054780.2yeast 2-hybrid15383276   
51176LEF11075NP_057353.1in vitro;in vivo;yeast 2-hybrid8631802   
84060C7orf6413173NP_115496.2in vitro15383276   


Pathway Information


      
Pathway Name Pathway ID
Influenza A hsa05164


Structure Information


PDB ID1EFX
Resolution3
MethodX-RAY DIFFRACTION
Chains A  
Molecule HLA-CW3 (HEAVY CHAIN)  
Model View



Domain Information




ID Location Description
cd00020113-238  ARM
cl22454113-238  ARM superfamily
cd00020252-364  ARM
cl22454252-364  ARM superfamily
cd00020329-449  ARM
cl22454329-449  ARM superfamily
pfam01749May-99  IBB
cl03339May-99  IBB superfamily
cd00020288-406  ARM
cd00020198-322  ARM
cd0002081-190  ARM
pfam00514324-364  Arm
pfam00514151-190  Arm
smart00185151-190  ARM
smart00185324-364  ARM
pfam13513134-189  HEAT_EZ
smart00185366-406  ARM
pfam00514367-406  Arm
pfam00514242-280  Arm
smart00185242-280  ARM
pfam00514409-447  Arm
pfam00514109-149  Arm
smart00185108-149  ARM
smart00185282-321  ARM
smart00185411-447  ARM
pfam00514282-322  Arm
pfam13513231-278  HEAT_EZ
pfam00514197-238  Arm
COG506410-528  SRP1
PLN0320078-191  PLN03200
PLN0320095-365  PLN03200
pfam13646121-217  HEAT_2


Ontology Information


   
HPRD ID178
Molecular ClassTransport/cargo protein
Molecular FunctionReceptor activity (GO:0004872)
Biological ProcessCell communication (GO:0007154); Signal transduction (GO:0007165)  



SNP Information


View SNP Geneview Report   

Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO