Search results:
General Information
| Gene_Symbol | Gene_ID | Gene_Name | Chromosome | Alias |
|---|---|---|---|---|
| LAMB2 | 3913 | Laminin, beta 2 (laminin S)  | 3 | LAMS; NPHS5  |
- Evidence
- Gene
- mRNA
- CDS
- Protein
- PTM
- Enzyme
- PPi
- Pathway
- Structural
- Domain
- Ontology
- SNP
- Drug
- External Links
Evidence Information
| Pubmed ID | Year | Sample Information | Techniques | Mechanism | Fold Change | Remark |
|---|---|---|---|---|---|---|
| 20089989    | 2010 | Cell line : - Source : VU University Medical Center, Amsterdam, The Netherlands. Sample Type : CRC tumor and normal tissue No. of Sample : - Stage : - | Biochemical isolation to nano-LC-MS/MS analysis | Up-regulation | - | This genes are differenitially expressed between colorectal adenoma and Colorectal cancer tissue. |
Gene Details

| Gene Type | protein coding |
|---|---|
| Gene Family | Laminins |
| Description | Laminins, a family of extracellular matrix glycoproteins, are the major noncollagenous constituent of basement membranes. They have been implicated in a wide variety of biological processes including cell adhesion, differentiation, migration, signaling, neurite outgrowth and metastasis. Laminins, composed of 3 non identical chains: laminin alpha, beta and gamma (formerly A, B1, and B2, respectively), form a cruciform structure consisting of 3 short arms, each formed by a different chain, and a long arm composed of all 3 chains. Each laminin chain is a multidomain protein encoded by a distinct gene. Several isoforms of each chain have been described. Different alpha, beta and gamma chain isomers combine to give rise to different heterotrimeric laminin isoforms which are designated by Arabic numerals in the order of their discovery, i.e. alpha1beta1gamma1 heterotrimer is laminin 1. The biological functions of the different chains and trimer molecules are largely unknown, but some of the chains have been shown to differ with respect to their tissue distribution, presumably reflecting diverse functions in vivo. This gene encodes the beta chain isoform laminin, beta 2. The beta 2 chain contains the 7 structural domains typical of beta chains of laminin, including the short alpha region. However, unlike beta 1 chain, beta 2 has a more restricted tissue distribution. It is enriched in the basement membrane of muscles at the neuromuscular junctions, kidney glomerulus and vascular smooth muscle. Transgenic mice in which the beta 2 chain gene was inactivated by homologous recombination, showed defects in the maturation of neuromuscular junctions and impairment of glomerular filtration. Alternative splicing involving a non consensus 5' splice site (gc) in the 5' UTR of this gene has been reported. It was suggested that inefficient splicing of this first intron, which does not change the protein sequence, results in a greater abundance of the unspliced form of the transcript than the spliced form. The full-length nature of the spliced transcript is not known. [provided by RefSeq, Aug 2011]   |
| Chromosome | 3 |
| Location | 3p21 |
| Start | 49121114   |
| End | 49133166   |
| Strand | -   |
| Gene Sequence |    Download   Select all |
| Length | 12053   |
| OMIM ID | 150325    |
| HGNC ID | HGNC:6487    |
| Unigene ID | Hs.439726     |
| Ensembl ID | ENSG00000172037    |
| PharmGKB ID | -    |
mRNA Information
| mRNA ID | NM_002292.3 |
|---|---|
| Exon | join(1..375,504..676,762..897,978..1051,1444..1632, 1725..1788,2015..2217,2307..2427,2748..2936,3149..3328, 3451..3563,3843..3922,4015..4147,4348..4506,4582..4709, 6670..6802,7008..7200,7277..7420,7683..7914,7998..8161, 8242..8466,8555..8772,8881..8977,9067..9439,9536..9720, 9794..10035,10115..10463,10797..11004,11082..11223, 11307..11483,11575..11734,11805..12053)   | mRNA Sequence |    Download   Select all |
| Length | 5817   |
CDS Information
| Location | join(300..375,504..676,762..897,978..1051,1444..1632, 1725..1788,2015..2217,2307..2427,2748..2936,3149..3328, 3451..3563,3843..3922,4015..4147,4348..4506,4582..4709, 6670..6802,7008..7200,7277..7420,7683..7914,7998..8161, 8242..8466,8555..8772,8881..8977,9067..9439,9536..9720, 9794..10035,10115..10463,10797..11004,11082..11223, 11307..11483,11575..11734,11805..11941) |
|---|---|
| CDS Sequence |    Download   Select all |
| CCDS ID | CCDS2789.1 |    
Protein Information
| Protein ID | NP_002283.3 |
|---|---|
| Protein Name | Laminin, beta 2 (laminin S) |
| Molecular Wt. (Da) | 192452 |
| Protein Sequence |    Download   Select all |
| Length | 1798   |
| Uniprot ID | P04233 |    
| Ensembl Protein ID | ENSP00000009530   |    
Post-translational Modification Information (Source : HPRD)
No matching records could be found.
Enzyme Information
No matching records could be found.
PPi Information
(Click to view network : Source STRING)      View   
No matching records from HPRD source could be found.
Pathway Information
| Pathway Name | Pathway ID |
|---|---|
| Amoebiasis |    hsa05146 |    
| ECM-receptor interaction |    hsa04512 |    
| Focal adhesion |    hsa04510 |    
| Pathways in cancer |    hsa05200 |    
| PI3K-Akt signaling pathway |    hsa04151 |    
| Small cell lung cancer |    hsa05222 |    
| Toxoplasmosis |    hsa05145 |    
Structure Information
No matching records could be found.
Domain Information
| ID | Location | Description |
|---|---|---|
| cd00055 | 782-829  | EGF_Lam |
| cl22875 | 782-829  | EGF_Lam superfamily |
| cd00055 | 521-562  | EGF_Lam |
| cl22875 | 521-562  | EGF_Lam superfamily |
| cd00055 | 469-520  | EGF_Lam |
| cl22875 | 469-520  | EGF_Lam superfamily |
| cd00055 | 1037-1093  | EGF_Lam |
| cl22875 | 1037-1093  | EGF_Lam superfamily |
| cd00055 | 1142-1191  | EGF_Lam |
| cl22875 | 1142-1191  | EGF_Lam superfamily |
| cd00055 | 1094-1136  | EGF_Lam |
| cl22875 | 1094-1136  | EGF_Lam superfamily |
| cd00055 | 830-873  | EGF_Lam |
| cl22875 | 830-873  | EGF_Lam superfamily |
| cd00055 | 409-468  | EGF_Lam |
| cl22875 | 409-468  | EGF_Lam superfamily |
| cd00055 | 876-921  | EGF_Lam |
| cl22875 | 876-921  | EGF_Lam superfamily |
| cd00055 | 986-1032  | EGF_Lam |
| cl22875 | 986-1032  | EGF_Lam superfamily |
| cd00055 | 926-984  | EGF_Lam |
| cl22875 | 926-984  | EGF_Lam superfamily |
| cd00055 | 347-399  | EGF_Lam |
| cl22875 | 347-399  | EGF_Lam superfamily |
| cd00055 | 283-335  | EGF_Lam |
| cl22875 | 283-335  | EGF_Lam superfamily |
| pfam00055 | 47-281  | Laminin_N |
| cl02806 | 47-281  | Laminin_N superfamily |
| smart00136 | 41-281  | LamNT |
| smart00180 | 783-828  | EGF_Lam |
| pfam00053 | 783-831  | Laminin_EGF |
| pfam00053 | 1095-1143  | Laminin_EGF |
| pfam00053 | 1143-1182  | Laminin_EGF |
| smart00180 | 522-561  | EGF_Lam |
| pfam00053 | 831-879  | Laminin_EGF |
| pfam00053 | 1038-1092  | Laminin_EGF |
| smart00180 | 1143-1187  | EGF_Lam |
| smart00180 | 1095-1140  | EGF_Lam |
| smart00180 | 1038-1092  | EGF_Lam |
| pfam00053 | 410-467  | Laminin_EGF |
| pfam00053 | 470-524  | Laminin_EGF |
| pfam00053 | 522-561  | Laminin_EGF |
| smart00180 | 831-874  | EGF_Lam |
| smart00180 | 470-513  | EGF_Lam |
| pfam00053 | 986-1028  | Laminin_EGF |
| pfam00053 | 877-924  | Laminin_EGF |
| smart00180 | 410-460  | EGF_Lam |
| smart00180 | 986-1028  | EGF_Lam |
| pfam00053 | 953-983  | Laminin_EGF |
| PRK07353 | 1687-1773  | PRK07353 |
| cl21478 | 1687-1773  | Mt_ATP-synt_B superfamily |
| pfam14346 | 1443-1517  | DUF4398 |
| cl20518 | 1443-1517  | DUF4398 superfamily |
| pfam00053 | 347-398  | Laminin_EGF |
| smart00180 | 927-976  | EGF_Lam |
| smart00180 | 877-916  | EGF_Lam |
| TIGR02568 | 1483-1670  | LcrE |
| cl15454 | 1483-1670  | HrpJ superfamily |
| pfam05335 | 1615-1781  | DUF745 |
| cl22536 | 1615-1781  | DUF745 superfamily |
| PRK14475 | 1680-1792  | PRK14475 |
| pfam05960 | 1479-1752  | DUF885 |
| cl19872 | 1479-1752  | DUF885 superfamily |
| pfam00053 | 306-338  | Laminin_EGF |
| cd13406 | 905-984  | TNFRSF4 |
| cl22855 | 905-984  | TNFRSF superfamily |
| pfam09831 | 1699-1772  | DUF2058 |
| cl01201 | 1699-1772  | DUF2058 superfamily |
| smart00180 | 347-400  | EGF_Lam |
| cd00176 | 1504-1754  | SPEC |
| cl02488 | 1504-1754  | SPEC superfamily |
| PRK14475 | 1603-1702  | PRK14475 |
| cl21478 | 1603-1702  | Mt_ATP-synt_B superfamily |
| TIGR02473 | 1709-1772  | flagell_FliJ |
| cl21477 | 1709-1772  | FliJ superfamily |
| cd07596 | 1637-1797  | BAR_SNX |
| cl12013 | 1637-1797  | BAR superfamily |
| pfam05130 | 1661-1795  | FlgN |
| cl09176 | 1661-1795  | FlgN superfamily |
| smart00283 | 1445-1701  | MA |
| pfam13514 | 1202-1789  | AAA_27 |
| PRK02224 | 1462-1781  | PRK02224 |
| pfam12128 | 1203-1756  | DUF3584 |
| COG1196 | 1202-1798  | Smc |
| pfam12128 | 1199-1767  | DUF3584 |
| COG1196 | 1447-1792  | Smc |
| TIGR02168 | 1201-1787  | SMC_prok_B |
| COG4372 | 1561-1792  | COG4372 |
| TIGR02168 | 1201-1793  | SMC_prok_B |
| COG1196 | 1445-1767  | Smc |
| PRK04863 | 1446-1793  | mukB |
| pfam01576 | 1462-1782  | Myosin_tail_1 |
| TIGR02169 | 1453-1786  | SMC_prok_A |
| TIGR00618 | 1210-1793  | sbcc |
| pfam13514 | 1252-1788  | AAA_27 |
| COG0419 | 1452-1795  | SbcC |
| PTZ00121 | 1455-1772  | PTZ00121 |
| TIGR02169 | 1460-1754  | SMC_prok_A |
| pfam05701 | 1439-1787  | WEMBL |
| COG5281 | 1452-1788  | COG5281 |
| pfam01576 | 1450-1782  | Myosin_tail_1 |
| TIGR02168 | 1452-1788  | SMC_prok_B |
| PRK02224 | 1445-1787  | PRK02224 |
| COG2268 | 1460-1712  | YqiK |
| PRK04863 | 1452-1773  | mukB |
| TIGR02168 | 1447-1776  | SMC_prok_B |
| COG1196 | 1465-1785  | Smc |
| TIGR02680 | 1459-1786  | TIGR02680 |
| PTZ00121 | 1475-1769  | PTZ00121 |
| pfam13514 | 1194-1794  | AAA_27 |
| COG1538 | 1492-1792  | TolC |
| pfam01576 | 1456-1792  | Myosin_tail_1 |
| PTZ00121 | 1460-1772  | PTZ00121 |
| COG0840 | 1446-1703  | Tar |
| TIGR02680 | 1260-1749  | TIGR02680 |
| COG3206 | 1559-1796  | GumC |
| COG4942 | 1536-1781  | EnvC |
| PRK02224 | 1574-1788  | PRK02224 |
| TIGR02680 | 1425-1773  | TIGR02680 |
| COG2268 | 1580-1776  | YqiK |
| COG4372 | 1462-1705  | COG4372 |
| TIGR02680 | 1202-1792  | TIGR02680 |
| TIGR02680 | 1203-1782  | TIGR02680 |
| COG3170 | 1339-1760  | FimV |
| PTZ00121 | 1460-1782  | PTZ00121 |
| pfam10174 | 1443-1788  | Cast |
| COG0419 | 1473-1779  | SbcC |
| TIGR02169 | 1519-1787  | SMC_prok_A |
| COG3096 | 1453-1787  | MukB |
| pfam13514 | 1546-1778  | AAA_27 |
| COG4942 | 1453-1695  | EnvC |
| pfam12795 | 1574-1772  | MscS_porin |
| pfam05557 | 1454-1782  | MAD |
| TIGR02794 | 1475-1754  | tolA_full |
| COG4372 | 1460-1651  | COG4372 |
| PRK10929 | 1483-1796  | PRK10929 |
| PRK07735 | 1476-1732  | PRK07735 |
| COG3064 | 1598-1748  | TolA |
| COG1842 | 1493-1722  | PspA |
| TIGR02680 | 1198-1786  | TIGR02680 |
| TIGR02169 | 1561-1793  | SMC_prok_A |
| pfam07111 | 1561-1777  | HCR |
| TIGR02169 | 1461-1787  | SMC_prok_A |
| COG4942 | 1536-1782  | EnvC |
| PRK04863 | 1579-1782  | mukB |
| TIGR02302 | 1487-1759  | aProt_lowcomp |
| pfam12128 | 1443-1793  | DUF3584 |
| pfam01576 | 1446-1782  | Myosin_tail_1 |
| TIGR00618 | 1489-1788  | sbcc |
| pfam06008 | 1456-1681  | Laminin_I |
| pfam15070 | 1488-1779  | GOLGA2L5 |
| pfam04012 | 1449-1680  | PspA_IM30 |
| pfam04012 | 1594-1781  | PspA_IM30 |
| pfam05701 | 1584-1782  | WEMBL |
| TIGR03185 | 1451-1793  | DNA_S_dndD |
| pfam06008 | 1559-1779  | Laminin_I |
| COG2268 | 1459-1792  | YqiK |
| COG3096 | 1585-1791  | MukB |
| PTZ00121 | 1460-1722  | PTZ00121 |
| COG4372 | 1456-1730  | COG4372 |
| pfam09726 | 1332-1722  | Macoilin |
| pfam13868 | 1455-1775  | Trichoplein |
| COG3064 | 1569-1771  | TolA |
| pfam07111 | 1457-1752  | HCR |
| COG4942 | 1541-1751  | EnvC |
| PTZ00121 | 1462-1769  | PTZ00121 |
| TIGR02168 | 1561-1792  | SMC_prok_B |
| COG3883 | 1483-1715  | CwlO1 |
| PRK12472 | 1603-1747  | PRK12472 |
| PRK02224 | 1263-1703  | PRK02224 |
| TIGR02917 | 1444-1774  | PEP_TPR_lipo |
| PRK10246 | 1197-1762  | PRK10246 |
| pfam04012 | 1558-1754  | PspA_IM30 |
| TIGR02971 | 1452-1718  | heterocyst_DevB |
| pfam05622 | 1443-1792  | HOOK |
| TIGR01843 | 1533-1783  | type_I_hlyD |
| pfam05557 | 1461-1795  | MAD |
| pfam00769 | 1636-1772  | ERM |
| TIGR02794 | 1603-1772  | tolA_full |
| COG3206 | 1445-1665  | GumC |
| pfam10174 | 1451-1766  | Cast |
| pfam00529 | 1636-1783  | HlyD |
| PRK10246 | 1450-1771  | PRK10246 |
| COG0711 | 1476-1615  | AtpF |
| COG3096 | 1492-1783  | MukB |
| pfam07111 | 1445-1786  | HCR |
| COG0419 | 1550-1798  | SbcC |
| TIGR02302 | 1490-1755  | aProt_lowcomp |
| PRK12472 | 1571-1698  | PRK12472 |
| TIGR03348 | 1555-1732  | VI_IcmF |
| TIGR04510 | 1564-1753  | mod_pep_cyc |
| PRK04863 | 1476-1777  | mukB |
| COG3206 | 1457-1728  | GumC |
| COG3599 | 1486-1638  | DivIVA |
| COG0711 | 1690-1773  | AtpF |
| pfam05262 | 1559-1740  | Borrelia_P83 |
| pfam13868 | 1477-1793  | Trichoplein |
| pfam15558 | 1581-1787  | DUF4659 |
| COG3599 | 1568-1751  | DivIVA |
| PRK14473 | 1453-1541  | PRK14473 |
| TIGR02169 | 1460-1731  | SMC_prok_A |
| COG1842 | 1646-1781  | PspA |
| pfam06008 | 1504-1753  | Laminin_I |
| COG1842 | 1607-1792  | PspA |
| COG1340 | 1457-1761  | COG1340 |
| pfam12795 | 1459-1701  | MscS_porin |
| COG1538 | 1444-1688  | TolC |
| COG3064 | 1454-1691  | TolA |
| pfam06008 | 1549-1762  | Laminin_I |
| TIGR02169 | 1624-1781  | SMC_prok_A |
| COG4717 | 1456-1788  | YhaN |
| PRK09510 | 1582-1778  | tolA |
| PRK07735 | 1456-1725  | PRK07735 |
| PRK04863 | 1449-1739  | mukB |
| COG0845 | 1536-1793  | AcrA |
| PRK12402 | 1533-1681  | PRK12402 |
| pfam00769 | 1581-1769  | ERM |
| pfam00261 | 1579-1782  | Tropomyosin |
| pfam07888 | 1497-1780  | CALCOCO1 |
| TIGR02977 | 1559-1756  | phageshock_pspA |
| pfam00529 | 1443-1615  | HlyD |
| pfam04632 | 1528-1756  | FUSC |
| TIGR02971 | 1646-1793  | heterocyst_DevB |
| PRK06669 | 1462-1563  | fliH |
| PRK11281 | 1548-1791  | PRK11281 |
| PRK07352 | 1610-1757  | PRK07352 |
| TIGR02169 | 1460-1740  | SMC_prok_A |
| TIGR01843 | 1533-1752  | type_I_hlyD |
| TIGR00634 | 1452-1632  | recN |
| PRK09039 | 1644-1793  | PRK09039 |
| pfam13779 | 1487-1781  | DUF4175 |
| pfam11180 | 1539-1669  | DUF2968 |
| pfam13868 | 1582-1780  | Trichoplein |
| PRK09510 | 1580-1742  | tolA |
| COG2909 | 1460-1773  | MalT |
| pfam00430 | 1701-1772  | ATP-synt_B |
| pfam00038 | 1450-1664  | Filament |
| pfam06818 | 1601-1782  | Fez1 |
| COG3264 | 1608-1742  | MscK |
| COG3264 | 1460-1593  | MscK |
| COG1538 | 1555-1750  | TolC |
| COG1570 | 1623-1791  | XseA |
| PRK15374 | 1586-1779  | PRK15374 |
| pfam00430 | 1690-1768  | ATP-synt_B |
| COG3264 | 1633-1786  | MscK |
| PRK04863 | 1187-1681  | mukB |
| COG3264 | 1440-1643  | MscK |
| pfam12795 | 1460-1622  | MscS_porin |
| pfam11180 | 1445-1525  | DUF2968 |
| pfam02841 | 1711-1769  | GBP_C |
| pfam12795 | 1452-1526  | MscS_porin |
| PRK05035 | 1584-1772  | PRK05035 |
| pfam11180 | 1455-1519  | DUF2968 |
| pfam13851 | 1727-1789  | GAS |
| pfam00430 | 1627-1750  | ATP-synt_B |
| pfam06818 | 1457-1612  | Fez1 |
| pfam04111 | 1263-1335  | APG6 |
Ontology Information
| HPRD ID | 4686 |    
|---|---|
| Molecular Class | Extracellular matrix protein |
| Molecular Function | Protein binding (GO:0005515) |
| Biological Process | Cell cycle (GO:0007049)   |
Drug Information
No matching records could be found.
External Links
| ArrayExpress | GO |    
|---|---|
| ICGC | GO |    
| Cancer3D | GO |    
| COSMIC | GO |    
| NCG | GO |    
| TSGene | GO |    
| Tumor Gene Family of Databases | GO |    
| CCDB | GO |    
| G2SBC | GO |    
| Osteosarcoma Database | GO |    
| RCDB | GO |    
