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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
LOX 4015 lysyl oxidase  5- 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
26194111   2015Cell line : -

Source : -

Sample Type : -

No. of Sample : -

Stage : -

-Down-regulation- Decreased expression of 15-LOX-1 may lead to the development of colitis-associated colorectal cancer and colorectal cancer.


Gene Details



NC_000005.9 (121398890..121414206, complement)

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Gene Type protein coding
Gene Family -
Description This gene encodes a member of the lysyl oxidase family of proteins. Alternative splicing results in multiple transcript variants, at least one of which encodes a preproprotein that is proteolytically processed to generate a regulatory propeptide and the mature enzyme. The copper-dependent amine oxidase activity of this enzyme functions in the crosslinking of collagens and elastin, while the propeptide may play a role in tumor suppression. [provided by RefSeq, Nov 2015]  
Chromosome 5
Location 5q23.3-q31
Start 121398890  
End 121414206  
Strand -  
Gene Sequence

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Length 15317  
OMIM ID 153455   
HGNC ID HGNC:6664   
Unigene ID Hs.102267   
Ensembl ID ENSG00000113083   
PharmGKB ID PA30427   

mRNA Information


mRNA ID NM_002317.6
Exon join(1..1006,1360..1468,2820..2957,4192..4348,7772..7867, 8193..8308,11612..15166)  
mRNA Sequence

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Length 5332  



CDS Information


   
Location517..1770
CDS Sequence

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CCDS ID CCDS4129.1



Protein Information


      
Protein IDNP_002308.2
Protein Namelysyl oxidase
Molecular Wt. (Da)0
Protein Sequence

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Length 417  
Uniprot IDP28347
Ensembl Protein ID ENSP00000334754  



Post-translational Modification Information (Source : HPRD)


Residue Type site
EProteolytic Cleavage34

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                                             
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
1805DPT510NP_001928.2in vivo8082810   
2006ELN556NP_000492.2in vivo6912069   
3009HIST1H1B821NP_005313.1in vitro12686141   


Pathway Information


No matching records could be found.

Structure Information


No matching records could be found.

Domain Information




ID Location Description
pfam01186213-417  Lysyl_oxidase
cl03127213-417  Lysyl_oxidase superfamily


Ontology Information


   
HPRD ID2975
Molecular ClassEnzyme: Oxidase
Molecular FunctionDNA binding (GO:0003677)
Biological ProcessRegulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism (GO:0019219)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO