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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
MMP2 4313 matrix metallopeptidase 2  16CLG4; MONA; CLG4A; MMP-2; TBE-1; MMP-II 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
23801889   2013Cell line : -

Source : China Medical University Hospital, Taiwan

Sample Type : CRC Tumor

No. of Sample : 282

Stage : -

Genotyping, Kaplan-Meier analysis, Cox regression model, survival tree analysisPolymorhpism-MMP2 might be potential predictors of distant metastasis-free survival after curative surgery.

24289619   2013Cell line : -

Source : Saudi population King Khalid University Hospital in Riyadh, KSA.

Sample Type : CRC Tumor and adjecent normal tissue

No. of Sample : 12

Stage : -

TaqMan allele discrimination assays and DNA sequencing,PCR, and sequencing,real-time RT-PCR,Genotyping Polymorhpism10 FoldThe MMP-2 C-1306T SNP in the promoter region was associated with CRC in our Saudi population and the MMP-2 gene expression level was found to be 10 times higher in CRC patients.

24998576   2014Cell line : -

Source : Saudi population, King Khalid University Hospital Riydh Kingdom of Saudi Arabia.

Sample Type : CRC Tumor and adjecent normal tissue

No. of Sample : 250

Stage : -

PCR sequencing, real time RT-PCRPolymorhpism-risk associated with the SNPs, including genes for COX-2 (A/G transition at +202) and MMP-2 (C/T transition at-1306), with colorectal cancer in 125 patients and 125 healthy controls.


Gene Details



NC_000016.9 (55513081..55540586)

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Gene Type protein coding
Gene Family Matrix metallopeptidases
Description This gene is a member of the matrix metalloproteinase (MMP) gene family, that are zinc-dependent enzymes capable of cleaving components of the extracellular matrix and molecules involved in signal transduction. The protein encoded by this gene is a gelatinase A, type IV collagenase, that contains three fibronectin type II repeats in its catalytic site that allow binding of denatured type IV and V collagen and elastin. Unlike most MMP family members, activation of this protein can occur on the cell membrane. This enzyme can be activated extracellularly by proteases, or, intracellulary by its S-glutathiolation with no requirement for proteolytical removal of the pro-domain. This protein is thought to be involved in multiple pathways including roles in the nervous system, endometrial menstrual breakdown, regulation of vascularization, and metastasis. Mutations in this gene have been associated with Winchester syndrome and Nodulosis-Arthropathy-Osteolysis (NAO) syndrome. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Oct 2014]  
Chromosome 16
Location 16q12.2
Start 55513081  
End 55540586  
Strand +  
Gene Sequence

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Length 27506  
OMIM ID 120360   
HGNC ID HGNC:7166   
Unigene ID Hs.513617   
Ensembl ID ENSG00000087245   
PharmGKB ID PA30877   

mRNA Information


mRNA ID ?NM_001127891.2
Exon  
mRNA Sequence

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Length  



CDS Information


   
Location
CDS Sequence

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CCDS ID CCDS10752.1



Protein Information


      
Protein ID
Protein Namematrix metallopeptidase 2
Molecular Wt. (Da)0
Protein Sequence

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Length 0  
Uniprot IDP04637
Ensembl Protein ID ENSP00000269305  



Post-translational Modification Information (Source : HPRD)


Residue Type site
NProteolytic Cleavage66
NProteolytic Cleavage109
NProteolytic Cleavage66
TPhosphorylation364

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                                                                                                                                                                                                                                                
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
2A2M72NP_000005.2in vitro9344465   
1277COL1A1362NP_000079.2in vitro11368514   
1293COL6A3371NP_004360.2in vitro8862926   
1294COL7A1358NP_000085.1in vivo10652000   
1404HAPLN1275NP_001875.1in vitro7694569   
1634DCN501NP_001911.1in vitro9148753   
2048EPHB22997NP_004433.2in vitro18713744   
2260FGFR1634NP_000595.1in vitro;in vivo8692946   
3486IGFBP3899NP_001013416.1in vitro7523391   
3553IL1B985NP_000567.1in vitro8663297   
3814KISS14475NP_002247.3in vitro;in vivo12879005   
3958LGALS31090NP_002297.2in vitro7947821   
5858PZP7178NP_002855.2in vitro9344465   
6354CCL71150CAA50405.1in vitro;in vivo;yeast 2-hybrid1   094   798   912   149   190   
63827BCAN2644NP_068767.3in vitro10986281   
80781COL18A1382NP_569711.2in vitro;in vivo12023034   


Pathway Information


                                          
Pathway Name Pathway ID
AGE-RAGE signaling pathway in diabetic complications hsa04933
Bladder cancer hsa05219
Estrogen signaling pathway hsa04915
GnRH signaling pathway hsa04912
Leukocyte transendothelial migration hsa04670
Pathways in cancer hsa05200
Proteoglycans in cancer hsa05205


Structure Information


No matching records could be found.

Domain Information




ID Location Description
cd00094466-660  HX
cl02471466-660  HX superfamily
cd04278118-446  ZnMc_MMP
cl00064118-446  ZnMc superfamily
cd00062343-390  FN2
cl09951343-390  FN2 superfamily
cd00062285-332  FN2
cl09951285-332  FN2 superfamily
cd00062227-274  FN2
cl09951227-274  FN2 superfamily
smart00059342-390  FN2
smart00059284-332  FN2
smart00059226-274  FN2
pfam00040349-390  fn2
pfam00040233-274  fn2
pfam00040291-332  fn2
smart00120568-614  HX
pfam00045568-614  Hemopexin
cd04279387-446  ZnMc_MMP_like_1
cd00203394-445  ZnMc
pfam0147152-97  PG_binding_1
cl1836852-97  PG_binding_1 superfamily
pfam00045475-517  Hemopexin
pfam00045520-563  Hemopexin
cd04277364-446  ZnMc_serralysin_like
smart00120520-563  HX
cd04268400-445  ZnMc_MMP_like
smart00120475-517  HX
cd04267399-446  ZnMc_ADAM_like
cd00203124-222  ZnMc
cd04268121-201  ZnMc_MMP_like
pfam00413118-446  Peptidase_M10
smart00235115-218  ZnMc


Ontology Information


   
HPRD ID1839
Molecular ClassNot Available
Molecular FunctionCytoskeletal protein binding (GO:0008092)
Biological ProcessCell growth and/or maintenance (GO:0008151)  



SNP Information


View SNP Geneview Report   

Drug Information


Uniprot ID DrugBank ID Name Type
P08253DB00786MarimastatSmallMoleculeDrug
P08253DB01197CaptoprilSmallMoleculeDrug

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO