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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
MMP10 4319 Matrix metallopeptidase 10 (stromelysin 2)  11SL-2; STMY2 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
22930170   2012Cell line : KM12C, KM 12SM, HT 29

Source : ATCC

Sample Type : -

No. of Sample : -

Stage : -

Microarray analysis,Real time RT-PCR and Flow cytometryUp-regulation-Gene differentially expressed and analysed bye by Microarray.


Gene Details



Chromosome: 11; NC_000011.9 (102641233..102651359, complement)

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Gene Type protein coding
Gene Family -
Description Proteins of the matrix metalloproteinase (MMP) family are involved in the breakdown of extracellular matrix in normal physiological processes, such as embryonic development, reproduction, and tissue remodeling, as well as in disease processes, such as arthritis and metastasis. Most MMP's are secreted as inactive proproteins which are activated when cleaved by extracellular proteinases. The enzyme encoded by this gene degrades proteoglycans and fibronectin. The gene is part of a cluster of MMP genes which localize to chromosome 11q22.3. [provided by RefSeq, Jul 2008]  
Chromosome 11
Location 11q22.3
Start 102770502  
End 102780628  
Strand +  
Gene Sequence

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Length 10127  
OMIM ID 185260   
HGNC ID HGNC:7156   
Unigene ID Hs.2258    
Ensembl ID ENSG00000166670   
PharmGKB ID -   

mRNA Information


mRNA ID NM_002425.2
Exon join(1..142,884..1125,1268..1416,1880..2005,3853..4017, 4205..4349,5308..5441,7623..7782,8514..8617,9736..10127)  
mRNA Sequence

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Length 1777  



CDS Information


   
Location join(38..142,884..1125,1268..1416,1880..2005,3853..4017, 4205..4349,5308..5441,7623..7782,8514..8617,9736..9836)
CDS Sequence

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CCDS ID CCDS8321.1



Protein Information


      
Protein IDNP_002416.1
Protein NameMatrix metallopeptidase 10 (stromelysin 2)
Molecular Wt. (Da)52308
Protein Sequence

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Length 476  
Uniprot IDQ99626
Ensembl Protein ID ENSP00000370408  



Post-translational Modification Information (Source : HPRD)


No matching records could be found.

Enzyme Information


   
EC3.4.24.22
Namestromelysin 2
matrix metalloproteinase 10
transin 2
proteoglycanase 2
ClassHydrolases; Acting on peptide bonds (peptidases); Metalloendopeptidases
Sysname  
Substrate  
Product  
Reaction (IUBMB)



PPi Information


(Click to view network : Source STRING)      View   

                              
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
1404HAPLN1275NP_001875.1in vitro7694569   
4318MMP9387NP_004985.2in vitro9578462   


Pathway Information


No matching records could be found.

Structure Information


No matching records could be found.

Domain Information




ID Location Description
cd04278107-263  ZnMc_MMP
cl00064107-263  ZnMc superfamily
cd00094286-476  HX
cl02471286-476  HX superfamily
cd04277131-263  ZnMc_serralysin_like
cd00203113-262  ZnMc
cd04279118-263  ZnMc_MMP_like_1
smart00120387-434  HX
pfam00045387-434  Hemopexin
cd04268113-262  ZnMc_MMP_like
pfam0147133-86  PG_binding_1
cl1836833-86  PG_binding_1 superfamily
pfam00045295-337  Hemopexin
pfam00045339-382  Hemopexin
smart00120295-337  HX
smart00120339-382  HX
COG5549108-265  COG5549
cd04267203-263  ZnMc_ADAM_like
cd04269209-227  ZnMc_adamalysin_II_like
pfam00413107-263  Peptidase_M10
smart00235104-264  ZnMc


Ontology Information


   
HPRD ID3883
Molecular ClassMetallo protease
Molecular FunctionAuxiliary transport protein activity (GO:0015457)
Biological ProcessTransport (GO:0006810)  



SNP Information


View SNP Geneview Report   

Drug Information


Uniprot ID DrugBank ID Name Type
P09238DB00786MarimastatSmallMoleculeDrug

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO