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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
PPL 5493 Periplakin  16- 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
20089989   2010Cell line : -

Source : VU University Medical Center, Amsterdam, The Netherlands.

Sample Type : CRC tumor and normal tissue

No. of Sample : -

Stage : -

Biochemical isolation to nano-LC-MS/MS analysisUp-regulation-This genes are differenitially expressed between colorectal adenoma and Colorectal cancer tissue.

CRC tissue was collected at the VU University Medical Center, Amsterdam, The Netherlands.


Gene Details



Chromosome: 16; NC_000016.9 (4932508..4987136, complement)

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Gene Type protein coding
Gene Family -
Description The protein encoded by this gene is a component of desmosomes and of the epidermal cornified envelope in keratinocytes. The N-terminal domain of this protein interacts with the plasma membrane and its C-terminus interacts with intermediate filaments. Through its rod domain, this protein forms complexes with envoplakin. This protein may serve as a link between the cornified envelope and desmosomes as well as intermediate filaments. AKT1/PKB, a protein kinase mediating a variety of cell growth and survival signaling processes, is reported to interact with this protein, suggesting a possible role for this protein as a localization signal in AKT1-mediated signaling. [provided by RefSeq, Jul 2008]  
Chromosome 16
Location 16p13.3
Start 4882507  
End 4937135  
Strand -  
Gene Sequence

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Length 54629  
OMIM ID 602871   
HGNC ID HGNC:9273   
Unigene ID Hs.192233    
Ensembl ID ENSG00000118898   
PharmGKB ID -   

mRNA Information


mRNA ID NM_002705.4
Exon join(1..152,26187..26286,33096..33250,34610..34730, 36047..36172,36265..36306,37752..37913,38016..38123, 39366..39461,41420..41542,41729..41875,42518..42669, 43498..43595,43766..43923,44923..45101,45187..45325, 46215..46408,46802..46952,48075..48158,48918..49034, 49909..50001,51089..54629)  
mRNA Sequence

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Length 6256  



CDS Information


   
Locationjoin(91..152,26187..26286,33096..33250,34610..34730, 36047..36172,36265..36306,37752..37913,38016..38123, 39366..39461,41420..41542,41729..41875,42518..42669, 43498..43595,43766..43923,44923..45101,45187..45325, 46215..46408,46802..46952,48075..48158,48918..49034, 49909..50001,51089..53752)
CDS Sequence

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CCDS ID CCDS10526.1



Protein Information


      
Protein IDNP_002696.3
Protein NamePeriplakin
Molecular Wt. (Da)204547
Protein Sequence

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Length 1756  
Uniprot IDP29762
Ensembl Protein ID ENSP00000299529  



Post-translational Modification Information (Source : HPRD)


Residue Type site
SPhosphorylation1331
DProteolytic Cleavage1603
TPhosphorylation1579
SPhosphorylation779
SPhosphorylation14
SPhosphorylation1657

Enzyme Information


   
EC3.1.1.3
Nametriacylglycerol lipase
lipase (ambiguous)
butyrinase
tributyrinase
Tween hydrolase
steapsin
triacetinase
tributyrin esterase
Tweenase
amno N-AP
Takedo 1969-4-9
Meito MY 30
Tweenesterase
GA 56
capalase L
triglyceride hydrolase
triolein hydrolase
tween-hydrolyzing esterase
amano CE
cacordase
triglyceridase
triacylglycerol ester hydrolase
amano P
amano AP
PPL
glycerol-ester hydrolase
GEH
meito Sangyo OF lipase
hepatic lipase
lipazin
post-heparin plasma protamine-resistant lipase
salt-resistant post-heparin lipase
heparin releasable hepatic lipase
amano CES
amano B
tributyrase
triglyceride lipase
liver lipase
hepatic monoacylglycerol acyltransferase
ClassHydrolases; Acting on ester bonds; Carboxylic-ester hydrolases
Sysnametriacylglycerol acylhydrolase  
Substratetriacylglycerol [CPD:C00422]; H2O  
Productdiacylglycerol [CPD:C00165]; carboxylate  
Reaction (IUBMB)



PPi Information


(Click to view network : Source STRING)      View   

                                                                           
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
207AKT11261NP_005154.2in vitro;in vivo12176997   
1308COL17A1223NP_000485.3yeast 2-hybrid9521878   
2125EVPL3352NP_001979.2in vitro;in vivo94   124   761   106   225   900   000   000   
7431VIM1899NP_003371.2yeast 2-hybrid12366696   
7874USP73950NP_003461.2yeast 2-hybrid16713569   


Pathway Information


No matching records could be found.

Structure Information


No matching records could be found.

Domain Information




ID Location Description
cd00176215-389  SPEC
cl02488215-389  SPEC superfamily
smart002501657-1685  PLEC
cl233491657-1685  PLEC superfamily
pfam05483789-1546  SCP-1
COG1196796-1587  Smc
PTZ00121818-1537  PTZ00121
TIGR02168946-1640  SMC_prok_B
COG1196946-1655  Smc
TIGR02169761-1592  SMC_prok_A
COG1196946-1651  Smc
TIGR02168758-1592  SMC_prok_B
COG1196967-1651  Smc
TIGR02169943-1656  SMC_prok_A
TIGR02168696-1493  SMC_prok_B
PRK03918987-1577  PRK03918
COG1196654-1426  Smc
COG1196866-1223  Smc
COG11961145-1582  Smc
TIGR021691243-1652  SMC_prok_A
TIGR021691004-1342  SMC_prok_A
TIGR02168586-1279  SMC_prok_B
TIGR021691037-1659  SMC_prok_A
COG11961005-1396  Smc
TIGR02168533-1221  SMC_prok_B
COG11961135-1513  Smc
TIGR00618946-1588  sbcc
pfam02463791-1588  SMC_N
COG0419967-1548  SbcC
PRK03918904-1424  PRK03918
COG0419767-1394  SbcC
pfam02463955-1653  SMC_N
TIGR00618637-1349  sbcc
COG1196771-1122  Smc
PRK039181080-1652  PRK03918
COG4942894-1147  EnvC
PRK022241078-1569  PRK02224
TIGR03185950-1273  DNA_S_dndD
TIGR021681378-1656  SMC_prok_B
pfam12128945-1597  DUF3584
TIGR02169743-1106  SMC_prok_A
COG4372896-1142  COG4372
COG04191150-1658  SbcC
COG4717805-1490  YhaN
PRK04863954-1350  mukB
pfam02463585-1391  SMC_N
PRK039181128-1651  PRK03918
pfam04111971-1103  APG6
pfam131661038-1397  AAA_13
pfam12128627-1346  DUF3584
PRK04863643-1492  mukB
TIGR045231089-1638  Mplasa_alph_rch
TIGR00606706-1485  rad50
COG12691009-1282  NtpI
pfam01496977-1256  V_ATPase_I
TIGR00606897-1624  rad50
pfam13514696-1397  AAA_27
pfam12128895-1587  DUF3584
COG0419534-1059  SbcC
TIGR033191008-1152  RNase_Y
COG1269898-1139  NtpI
pfam07111887-1425  HCR
COG3206932-1220  GumC
COG43721005-1208  COG4372
PRK02224889-1361  PRK02224
TIGR04523894-1349  Mplasa_alph_rch
pfam041111464-1601  APG6
PRK03918666-1255  PRK03918
pfam041111065-1221  APG6
COG49421243-1522  EnvC
PLN03229951-1360  PLN03229
pfam01576906-1548  Myosin_tail_1
pfam040121164-1352  PspA_IM30
TIGR03794930-1113  NHLM_micro_HlyD
PRK127041008-1151  PRK12704
pfam13514948-1622  AAA_27
pfam10174945-1656  Cast
TIGR04523894-1325  Mplasa_alph_rch
PRK095101023-1167  tolA
COG43721272-1522  COG4372
pfam04286899-1101  DUF445
TIGR045231088-1586  Mplasa_alph_rch
COG5022889-1348  COG5022
PRK114481002-1092  hsdR
COG04191246-1651  SbcC
COG49421303-1548  EnvC
PRK095101071-1187  tolA
TIGR04211944-1047  SH3_and_anchor
PRK04778894-1264  PRK04778
PRK04863854-1128  mukB
COG49421123-1354  EnvC
PRK05771994-1270  PRK05771
pfam055571034-1627  MAD
pfam06160894-1222  EzrA
PRK09510924-1146  tolA
pfam135141268-1598  AAA_27
COG24331217-1368  COG2433
PRK09039968-1135  PRK09039
COG4477948-1275  EzrA
PRK127041023-1176  PRK12704
pfam01576783-1486  Myosin_tail_1
pfam056221200-1618  HOOK
COG4942952-1176  EnvC
COG15791244-1389  COG1579
COG3096954-1352  MukB
PTZ00108904-1165  PTZ00108
pfam07111751-1355  HCR
COG30641028-1189  TolA
pfam135141058-1656  AAA_27
PRK095101035-1187  tolA
pfam024631320-1655  SMC_N
COG43721465-1656  COG4372
pfam097261160-1352  Macoilin
pfam05557585-1120  MAD
pfam041111501-1656  APG6
pfam078881147-1469  CALCOCO1
pfam06637997-1269  PV-1
COG12691243-1523  NtpI


Ontology Information


   
HPRD ID3596
Molecular ClassCytoskeletal protein
Molecular FunctionReceptor signaling complex scaffold activity (GO:0030159)
Biological ProcessCell communication (GO:0007154); Signal transduction (GO:0007165)  



SNP Information


View SNP Geneview Report   

Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO