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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
MUC13 56667 mucin 13, cell surface associated  3- 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
22914648   2012Cell line : LoVo, HT 29, T 84, SW620, SW480, SW48

Source : -

Sample Type : CRC tumor tissue array

No. of Sample : Tissue microarrays (TMAs) containing colon cancer tissues of various grades and adjacent normal tissues from eight patients

Stage : TNM Stage I-IV

Immunohistochemistry,tissue microarrays,RT-PCR Up-regulation- Significant increase in MUC13 expression in metastatic colon cancer and suggest a correlation between aberrant MUC13 localization (cytoplasmic and nuclear expression) and metastatic colon cancer.

24097071   2014Cell line : SW48,SW480,SW620,T84, HT 29

Source : ATCC

Sample Type : -

No. of Sample : -

Stage : -

Cell growth, colony formation, cell migration, and cell invasion assays,chromatin immunoprecipitation ,immunohistochemistry .Up-regulation-Overexpression of MUC13 increased cell growth, colony formation, cell migration, and invasion.


Gene Details



NC_000003.11 (124624289..124653595, complement)

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Gene Type protein coding
Gene Family Mucins
Description Epithelial mucins, such as MUC13, are a family of secreted and cell surface glycoproteins expressed by ductal and glandular epithelial tissues (Williams et al., 2001 [PubMed 11278439]).[supplied by OMIM, Jul 2008]  
Chromosome 3
Location 3q21.2
Start 124624289  
End 124653595  
Strand -  
Gene Sequence

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Length 29307  
OMIM ID 612181   
HGNC ID HGNC:7511   
Unigene ID Hs.5940   
Ensembl ID ENSG00000173702   
PharmGKB ID PA31312   

mRNA Information


mRNA ID ?NM_033049.3
Exon  
mRNA Sequence

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Length  



CDS Information


   
Location
CDS Sequence

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CCDS ID -



Protein Information


      
Protein IDNP_149038.3
Protein Namemucin 13, cell surface associated
Molecular Wt. (Da)0
Protein Sequence

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Length 512  
Uniprot IDQ6V0I7
Ensembl Protein ID ENSP00000335169  



Post-translational Modification Information (Source : HPRD)


No matching records could be found.

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

No matching records from HPRD source could be found.

Pathway Information


No matching records could be found.

Structure Information


No matching records could be found.

Domain Information




ID Location Description
pfam01390211-315  SEA
cl02507211-315  SEA superfamily
TIGR04561419-468  membra_charge
cl22843419-468  membra_charge superfamily
PRK119072-122  PRK11907
pfam0510915-175  Herpes_BLLF1
PRK1085616-110  PRK10856
COG388929-121  COG3889
pfam0510915-176  Herpes_BLLF1
COG388940-126  COG3889
PHA0324723-176  PHA03247
pfam0315435-176  Atrophin-1
PRK1279916-152  motB
PRK1333510-153  PRK13335
pfam0315421-174  Atrophin-1
pfam0510912-173  Herpes_BLLF1
PLN022179-117  PLN02217
PRK1495025-107  PRK14950
PHA0330718-175  PHA03307
pfam0510924-176  Herpes_BLLF1
PRK101183-104  PRK10118
PHA0325524-151  PHA03255
PRK1085652-128  PRK10856
PHA032551-162  PHA03255
PRK1190724-140  PRK11907
pfam0978664-162  CytochromB561_N
PRK1497130-158  PRK14971


Ontology Information


   
HPRD ID7022
Molecular ClassIntegral membrane protein
Molecular FunctionTransporter activity (GO:0005215)
Biological ProcessCell communication (GO:0007154); Signal transduction (GO:0007165)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO