Search results:
General Information
| Gene_Symbol | Gene_ID | Gene_Name | Chromosome | Alias |
|---|---|---|---|---|
| SALL4 | 57167 | spalt-like transcription factor 4 | 20 | dJ1112F19.1, ZNF797 |
- Evidence
- Gene
- mRNA
- CDS
- Protein
- PTM
- Enzyme
- PPi
- Pathway
- Structural
- Domain
- Ontology
- SNP
- Drug
- External Links
Evidence Information
| Pubmed ID | Year | Sample Information | Techniques | Mechanism | Fold Change | Remark |
|---|---|---|---|---|---|---|
| 25156818 | 2014 | Cell line : - Source : - Sample Type : CRC tumor and normal tissue No. of Sample : 111 Stage : - | real time RT-PCR | Up-regulation | - | SALL4 as a critical biomarker for efficient screening of patients to detect early stages of CRC. The blood copy number of SALL4 in recruited CRC patients was significantly higher than healthy controls |
Gene Details
| Gene Type | protein coding |
|---|---|
| Gene Family | Zinc fingers, C2H2-type |
| Description | The protein encoded by this gene may be a zinc finger transcription factor. Defects in this gene are a cause of Duane-radial ray syndrome (DRRS). |
| Chromosome | 20 |
| Location | 20q13.2 |
| Start | 51784009 |
| End | 51913245 |
| Strand | - |
| Gene Sequence | Download Select all |
| Length | 129237 |
| OMIM ID | 607343 |
| HGNC ID | HGNC:15924 |
| Unigene ID | Hs.517113 |
| Ensembl ID | ENSG00000101115 |
| PharmGKB ID | - |
mRNA Information
| mRNA ID | XM_011528919.1 |
|---|---|
| Exon | join(1..24,13009..13124,120894..123224,124105..124385, 128562..129237) | mRNA Sequence | Download Select all |
| Length | 3487 |
CDS Information
| Location | join(13121..13124,120894..123224,124105..124385, 128562..128981) |
|---|---|
| CDS Sequence | Download Select all |
| CCDS ID | - |
Protein Information
| Protein ID | NP_065169.1 |
|---|---|
| Protein Name | spalt-like transcription factor 4 |
| Molecular Wt. (Da) | 112101 |
| Protein Sequence | Download Select all |
| Length | 1053 |
| Uniprot ID | P01130 |
| Ensembl Protein ID | ENSP00000397829 |
Post-translational Modification Information (Source : HPRD)
| Residue | Type | site |
|---|---|---|
| S | Phosphorylation | 116 |
| S | Phosphorylation | 121 |
| S | Phosphorylation | 530 |
| T | Phosphorylation | 541 |
Enzyme Information
No matching records could be found.
PPi Information
(Click to view network : Source STRING) View
No matching records from HPRD source could be found.
Pathway Information
No matching records could be found.
Structure Information
No matching records could be found.
Domain Information
| ID | Location | Description |
|---|---|---|
| pfam13465 | 580-605 | zf-H2C2_2 |
| cl22375 | 580-605 | zf-H2C2_2 superfamily |
| pfam13465 | 884-909 | zf-H2C2_2 |
| cl22375 | 884-909 | zf-H2C2_2 superfamily |
| pfam13465 | 396-421 | zf-H2C2_2 |
| cl22375 | 396-421 | zf-H2C2_2 superfamily |
| pfam00096 | 898-920 | zf-C2H2 |
| cl23491 | 898-920 | zf-C2H2 superfamily |
| pfam00096 | 594-616 | zf-C2H2 |
| cl23491 | 594-616 | zf-C2H2 superfamily |
| pfam00096 | 626-648 | zf-C2H2 |
| cl23491 | 626-648 | zf-C2H2 superfamily |
| smart00355 | 626-648 | ZnF_C2H2 |
| cl18194 | 626-648 | ZnF_C2H2 superfamily |
| smart00355 | 382-404 | ZnF_C2H2 |
| cl18194 | 382-404 | ZnF_C2H2 superfamily |
| smart00355 | 898-920 | ZnF_C2H2 |
| cl18194 | 898-920 | ZnF_C2H2 superfamily |
| cd11674 | 791-891 | lambda-1 |
| cl17035 | 791-891 | lambda-1 superfamily |
| pfam00096 | 382-404 | zf-C2H2 |
| cl23491 | 382-404 | zf-C2H2 superfamily |
| pfam00096 | 872-892 | zf-C2H2 |
| cl23491 | 872-892 | zf-C2H2 superfamily |
| pfam13894 | 382-404 | zf-C2H2_4 |
| cl20498 | 382-404 | zf-C2H2_4 superfamily |
| pfam13894 | 626-648 | zf-C2H2_4 |
| cl20498 | 626-648 | zf-C2H2_4 superfamily |
| PHA00733 | 593-645 | PHA00733 |
| COG5048 | 562-920 | COG5048 |
Ontology Information
| HPRD ID | 1249 |
|---|---|
| Molecular Class | Transcription factor |
| Molecular Function | Cytokine activity (GO:0005125) |
| Biological Process | Cell communication (GO:0007154); Signal transduction (GO:0007165) |
Drug Information
No matching records could be found.