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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
PWP2 5822 PWP2 periodic tryptophan protein homolog (yeast)  21UTP1; PWP2H; EHOC-17 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
20089989   2010Cell line : -

Source : VU University Medical Center, Amsterdam, The Netherlands.

Sample Type : CRC tumor and normal tissue

No. of Sample : -

Stage : -

Biochemical isolation to nano-LC-MS/MS analysisUnknown--


Gene Details



Chromosome: 21; NC_000021.8 (45527208..45551063)

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Gene Type protein coding
Gene Family WD repeat domain containing
Description -  
Chromosome 21
Location 21q22.3
Start 44107290  
End 44131181  
Strand +  
Gene Sequence

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Length 23892  
OMIM ID 601475   
HGNC ID HGNC:9711   
Unigene ID Hs.449076    
Ensembl ID ENSG00000241945   
PharmGKB ID -   

mRNA Information


mRNA ID XM_011529667.1
Exon join(1..145,1695..1807,6464..6558,6890..6989,7336..7479, 7975..8110,8402..8631,10531..10674,11474..11544, 12098..12234,13059..13207,13342..13489,13663..13813, 14888..15068,17291..17438,18722..18830,19611..19676, 20286..20571)  
mRNA Sequence

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Length 3277  



CDS Information


   
Locationjoin(128..145,1695..1807,6464..6558,6890..6989,7336..7479, 7975..8110,8402..8631,10531..10674,11474..11544, 12098..12234,13059..13207,13342..13489,13663..13813, 14888..15068,17291..17438,18722..18830,19611..19676, 20643..20861,20958..21108,21263..21337,23308..23482)
CDS Sequence

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CCDS ID CCDS33579.1



Protein Information


      
Protein IDNP_005040.2
Protein NamePWP2 periodic tryptophan protein homolog (yeast)
Molecular Wt. (Da)102321
Protein Sequence

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Length 919  
Uniprot IDQ99062
Ensembl Protein ID ENSP00000332180  



Post-translational Modification Information (Source : HPRD)


Residue Type site
TPhosphorylation746
SPhosphorylation891
SPhosphorylation898
SPhosphorylation913
SPhosphorylation902
KAcetylation700
SPhosphorylation47
YPhosphorylation632
SPhosphorylation744
TPhosphorylation791
SPhosphorylation792

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

               
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
10040TOM1L15266NP_005477.2yeast 2-hybrid16169070   


Pathway Information


      
Pathway Name Pathway ID
Ribosome biogenesis in eukaryotes hsa03008


Structure Information


No matching records could be found.

Domain Information




ID Location Description
cd00200322-629  WD40
cl02567322-629  WD40 superfamily
cd00200292-571  WD40
cd00200370-714  WD40
cd00200291-529  WD40
pfam04003770-875  Utp12
cl23538770-875  Utp12 superfamily
cd0020096-443  WD40
cl0256796-443  WD40 superfamily
cd0020058-401  WD40
smart00320490-529  WD40
pfam00400491-529  WD40
cd0020035-216  WD40
cd0020022-216  WD40
pfam00400363-401  WD40
smart00320362-401  WD40
cd14961370-473  NHL_TRIM32_like
cl18310370-473  NHL superfamily
cd14962379-500  NHL_like_6
pfam00400405-443  WD40
smart00320404-443  WD40
cd05819371-472  NHL
cd14957339-472  NHL_like_2
cd05819379-472  NHL
COG231933-574  WD40
COG2319277-639  WD40
COG2319370-746  WD40
COG231920-463  WD40
COG2319374-739  WD40
PTZ00421468-529  PTZ00421
PLN00181394-530  PLN00181
PTZ00421497-591  PTZ00421


Ontology Information


   
HPRD ID1697
Molecular ClassCell cycle control protein
Molecular FunctionProtease inhibitor activity (GO:0030414)
Biological ProcessProtein metabolism (GO:0019538)  



SNP Information


View SNP Geneview Report   

Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO