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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
SCN7A 6332 Sodium channel, voltage-gated, type VII, alpha  2NaG; SCN6A; Nav2.1; Nav2.2 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
22968445   2012Cell line : -

Source : Department of Pathology of Wrocaw Medical University.

Sample Type : -

No. of Sample : -

Stage : -

Laser capture microdissection,FFPE-FASP,SAX fractionation,LC-MSMS,Label-free quantitation.Down-regulation0.068-


Gene Details



Chromosome: 2; NC_000002.11 (167260083..167343481, complement)

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Gene Type protein coding
Gene Family Sodium channels, Voltage-gated ion channels / Sodium channels
Description This gene encodes one of the many voltage-gated sodium channel proteins. For proper functioning of neurons and muscles during action potentials, voltage-gated sodium channels direct sodium ion diffusion for membrane depolarization. This sodium channel protein has some atypical characteristics; the similarity between the human and mouse proteins is lower compared to other orthologous sodium channel pairs. Also, the S4 segments, which sense voltage changes, have fewer positive charged residues that in other sodium channels; domain 4 has fewer arginine and lysine residues compared to other sodium channel proteins. Several alternatively spliced transcript variants exist, but the full-length natures of all of them remain unknown. [provided by RefSeq, Dec 2011]  
Chromosome 2
Location 2q21-q23
Start 166403468  
End 166494258  
Strand -  
Gene Sequence

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Length 90791  
OMIM ID 182392   
HGNC ID HGNC:10594   
Unigene ID Hs.596087   
Ensembl ID ENSG00000136546   
PharmGKB ID -   

mRNA Information


mRNA ID XM_006712681.2
Exon join(1..291,7291..7403,16549..16796,19915..20033, 20371..20460,21814..21942,23553..23644,28272..28478, 28728..28797,31729..31870,37183..37389,46551..46647, 49259..49497,50583..50756,52507..52863,61507..61941, 64985..65090,66317..66471,70827..71000,72962..73069, 77274..77552,81138..81191,81592..81729,83935..84039, 84324..84594,87613..90791)  
mRNA Sequence

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Length 7186  



CDS Information


   
Location join(16563..16796,19915..20033,20371..20460,21814..21942, 23553..23644,28272..28478,28728..28797,31729..31870, 37183..37389,46551..46647,49259..49497,50583..50756, 52507..52863,61507..61941,64985..65090,66317..66471, 70827..71000,72962..73069,77274..77552,81138..81191, 81592..81729,83935..84039,84324..84594,87613..88679)
CDS Sequence

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CCDS ID CCDS46442.1



Protein Information


      
Protein IDNP_002967.2
Protein NameSodium channel, voltage-gated, type VII, alpha
Molecular Wt. (Da)193363
Protein Sequence

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Length 1682  
Uniprot IDP09668
Ensembl Protein ID ENSP00000220166  



Post-translational Modification Information (Source : HPRD)


Residue Type site
SPhosphorylation58
YPhosphorylation72

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

No matching records from HPRD source could be found.

Pathway Information


      
Pathway Name Pathway ID
Adrenergic signaling in cardiomyocytes hsa04261


Structure Information


No matching records could be found.

Domain Information




ID Location Description
cd134331194-1246  Na_channel_gate
cl189131194-1246  Na_channel_gate superfamily
pfam06512743-940  Na_trans_assoc
cl05828743-940  Na_trans_assoc superfamily
pfam00520970-1192  Ion_trans
pfam00520539-717  Ion_trans
pfam00520146-393  Ion_trans
pfam005201285-1495  Ion_trans


Ontology Information


   
HPRD ID3464
Molecular ClassVoltage gated channel
Molecular FunctionOxidoreductase activity (GO:0016491)
Biological ProcessMetabolism (GO:0008152); Energy pathways (GO:0006091)  



SNP Information


View SNP Geneview Report   

Drug Information


Uniprot ID DrugBank ID Name Type
Q01118DB00313Valproic AcidSmallMoleculeDrug

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO