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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
XAGE1B 653220 X antigen family, member 1B  XCT12.1b 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
23156676   2012Cell line : -

Source : -

Sample Type : CRC tumor and normal tissue

No. of Sample : 39 samples for primary tumors and 64 samples for the peripheral blood of CRC

Stage : TNM stages III, IV

RT-PCRUp-regulation--


Gene Details



NC_000023.10 (52238810..52243954)

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Gene Type protein coding
Gene Family -
Description This gene is a member of the XAGE subfamily, which belongs to the GAGE family. The GAGE genes are expressed in a variety of tumors and in some fetal and reproductive tissues. This gene is strongly expressed in Ewing's sarcoma, alveolar rhabdomyosarcoma and normal testis. The protein encoded by this gene contains a nuclear localization signal and shares a sequence similarity with other GAGE/PAGE proteins. Because of the expression pattern and the sequence similarity, this protein also belongs to a family of CT (cancer-testis) antigens. Alternative splicing of this gene, in addition to alternative transcription start sites, results in multiple transcript variants. [provided by RefSeq, Jan 2010]  
Chromosome X
Location Xp11.22
Start 52238810  
End 52243954  
Strand +  
Gene Sequence

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Length 5145  
OMIM ID 300742, 300743   
HGNC ID HGNC:25400   
Unigene ID -   
Ensembl ID ENSG00000204382   
PharmGKB ID -   

mRNA Information


mRNA ID
Exon  
mRNA Sequence

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Length  



CDS Information


   
Location
CDS Sequence

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CCDS ID -



Protein Information


      
Protein ID
Protein NameX antigen family, member 1B
Molecular Wt. (Da)0
Protein Sequence

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Length 0  
Uniprot ID
Ensembl Protein ID  



Post-translational Modification Information (Source : HPRD)


No matching records could be found.

Enzyme Information


No matching records could be found.

PPi Information


No STRING Network could be found.

No matching records from HPRD source could be found.

Pathway Information


No matching records could be found.

Structure Information


No matching records could be found.

Domain Information


No matching records could be found.

Ontology Information


   
HPRD ID19655
Molecular ClassUnclassified
Molecular FunctionProtein binding (GO:0005515)
Biological ProcessCell adhesion (GO:0007155)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO