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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
TIMP2 7077 TIMP metallopeptidase inhibitor 2  17CSC-21K 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
21478099   2010Cell line : -

Source : Second General Surgery Department of the Biaystok Medical University Hospital

Sample Type : -

No. of Sample : 210 subjects 91 previously untreated colorectal cancer (CRC) patients, 28 patients with colorectal adenomas (CA) and 91 healthy subjects

Stage : -

ELISADown-regulation-TIMP-2 may usefull as a biomarker in the diagnosis of CRC, especially in combination with CEA. However, further investigation is necessary.

Serum levels of MMP-2 and TIMP-2 were significantly lower in CRC patients than in healthy subjects and decreased with tumor stage.


Gene Details



Chromosome 17 - NC_000017.11 (78852977..78925390, complement)

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Gene Type protein coding
Gene Family
Description This gene is a member of the TIMP gene family. The proteins encoded by this gene family are natural inhibitors of the matrix metalloproteinases, a group of peptidases involved in degradation of the extracellular matrix. In addition to an inhibitory role against metalloproteinases, the encoded protein has a unique role among TIMP family members in its ability to directly suppress the proliferation of endothelial cells. As a result, the encoded protein may be critical to the maintenance of tissue homeostasis by suppressing the proliferation of quiescent tissues in response to angiogenic factors, and by inhibiting protease activity in tissues undergoing remodelling of the extracellular matrix.  
Chromosome 17
Location 17q25
Start 78852977  
End 78925390  
Strand -  
Gene Sequence

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Length 72414  
OMIM ID 188825   
HGNC ID HGNC:11821   
Unigene ID Hs.633514   
Ensembl ID ENSG00000035862   
PharmGKB ID -   

mRNA Information


mRNA ID NM_003255.4
Exon join(1..432,51472..51572,54385..54493,67745..67869, 69527..72414)  
mRNA Sequence

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Length 3670  



CDS Information


   
Locationjoin(303..432,51472..51572,54385..54493,67745..67869, 69527..69724)
CDS Sequence

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CCDS ID CCDS11758.1



Protein Information


      
Protein IDNP_003246.1
Protein NameTIMP metallopeptidase inhibitor 2
Molecular Wt. (Da)21755
Protein Sequence

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Length 220  
Uniprot IDQ16270
Ensembl Protein ID ENSP00000295666  



Post-translational Modification Information (Source : HPRD)


No matching records could be found.

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                                             
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
3688ITGB1628NP_391987.1in vivo16326706   
4313MMP2386NP_004521.1in vitro;yeast 2-hybrid1   237   478   910   991   940   000   000   000   000   000   
4317MMP8385NP_002415.1in vitro10353844   


Pathway Information


No matching records could be found.

Structure Information


PDB ID1BR9
Resolution2.1
Method?? X-RAY DIFFRACTION
Chains A  
Molecule METALLOPROTEINASE-2 INHIBITOR  
Model View



Domain Information




ID Location Description
cd0358527-209  NTR_TIMP
cl0251227-209  NTR_like superfamily
smart0020627-203  NTR
pfam0096525-203  TIMP
cd0357727-151  NTR_TIMP_like
cd0352336-146  NTR_like


Ontology Information


   
HPRD ID2839
Molecular ClassExtracellular matrix protein
Molecular FunctionReceptor binding (GO:0005102)
Biological ProcessCell communication (GO:0007154); Signal transduction (GO:0007165)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO