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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
TLR2 7097 Toll-like receptor 2  4TIL4; CD282 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
22999059   2013Cell line : -

Source : Portuguese Institute of Oncology, Porto (IPOP) and Coimbra (IPOC).

Sample Type : CRC tumor and normal tissue

No. of Sample : 471 participants: 193 histologically confirmed CRC patients and 278 cancer-free controls

Stage : -

polymorphisms genotyping, RT-PCRPolymorhpism-The CC genotype of the TLR2??>C SNP was associated with 5-fold decreased risk of CRC development (OR = 0.21), which is a remarkable result for a SNP.

LR2??>C and TLR4 Asp299Gly SNPs significantly influence the risk of CRC development, suggesting that these TLRs SNPs may be genetic susceptibility markers for CRC.


Gene Details



Chromosome: 4; NC_000004.11 (154605441..154627243)

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Gene Type protein coding
Gene Family CD molecules
Description The protein encoded by this gene is a member of the Toll-like receptor (TLR) family which plays a fundamental role in pathogen recognition and activation of innate immunity. TLRs are highly conserved from Drosophila to humans and share structural and functional similarities. They recognize pathogen-associated molecular patterns (PAMPs) that are expressed on infectious agents, and mediate the production of cytokines necessary for the development of effective immunity. The various TLRs exhibit different patterns of expression. This gene is expressed most abundantly in peripheral blood leukocytes, and mediates host response to Gram-positive bacteria and yeast via stimulation of NF-kappaB. [provided by RefSeq, Jul 2008]  
Chromosome 4
Location 4q32
Start 153684256  
End 153706091  
Strand -  
Gene Sequence

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Length 21836  
OMIM ID 603028   
HGNC ID HGNC:11848   
Unigene ID Hs.519033    
Ensembl ID ENSG00000137462   
PharmGKB ID -   

mRNA Information


mRNA ID XM_005263197.2
Exon join(1..105,3647..3733,18637..21200)  
mRNA Sequence

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Length 2756  



CDS Information


   
Location 18653..21007
CDS Sequence

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CCDS ID CCDS3784.1



Protein Information


      
Protein IDNP_003255.2
Protein NameToll-like receptor 2
Molecular Wt. (Da)87516
Protein Sequence

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Length 784  
Uniprot IDP24855
Ensembl Protein ID ENSP00000246949  



Post-translational Modification Information (Source : HPRD)


No matching records could be found.

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                                                                                                                                                      
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
929CD141151NP_000582.1in vivo10395652   
3146HMGB11228NP_002119.1in vitro;in vivo16267105   
3654IRAK12235NP_001560.2in vivo10395652   
6435SFTPA11521NP_005402.3in vitro11724772   
7096TLR13119NP_003254.2in vivo12077222   
7184HSP90B11860NP_003290.1in vivo11912201   
8767RIPK24585NP_003812.1in vivo11894098   
23162MAPK8IP312014NP_055948.2in vivo12941697   
81793TLR105884NP_112218.2in vivo15728506   
148022TICAM16350NP_891549.1in vivo12471095   


Pathway Information


                                                                                                
Pathway Name Pathway ID
Amoebiasis hsa05146
Chagas disease (American trypanosomiasis) hsa05142
Hepatitis B hsa05161
Herpes simplex infection hsa05168
Inflammatory bowel disease (IBD) hsa05321
Legionellosis hsa05134
Leishmaniasis hsa05140
Malaria hsa05144
Measles hsa05162
Phagosome hsa04145
PI3K-Akt signaling pathway hsa04151
Proteoglycans in cancer hsa05205
Rheumatoid arthritis hsa05323
Toll-like receptor signaling pathway hsa04620
Toxoplasmosis hsa05145
Tuberculosis hsa05152


Structure Information


PDB ID1FYW
Resolution3
MethodX-RAY DIFFRACTION
Chains A  
Molecule TOLL-LIKE RECEPTOR 2  
Model View



Domain Information




ID Location Description
smart00255640-784  TIR
cl22869640-784  TIR_2 superfamily
pfam01582643-781  TIR
pfam13676644-741  TIR_2
smart00082533-586  LRRCT
cl15307533-586  LRRCT superfamily
pfam1385577-135  LRR_8
pfam13855477-535  LRR_8
pfam13855387-448  LRR_8
pfam1385554-112  LRR_8
PRK15370324-558  PRK15370
PLN0315054-134  PLN03150
pfam13855101-154  LRR_8
pfam1330655-177  LRR_5
PRK15387387-533  PRK15387
PLN0011340-206  PLN00113
PLN0011322-113  PLN00113
PLN0011340-535  PLN00113
pfam1385552-88  LRR_8


Ontology Information


   
HPRD ID1563
Molecular ClassCell surface receptor
Molecular FunctionPeptidase activity (GO:0008233)
Biological ProcessProtein metabolism (GO:0019538)  



SNP Information


View SNP Geneview Report   

Drug Information


Uniprot ID DrugBank ID Name Type
O60603DB00045OspA lipoproteinBiotechDrug

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO