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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
TM4SF4 7104 transmembrane 4 L six family member 4  3il-TMP 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
22011044   2012Cell line : -

Source : Department of Surgery at Fooyin University Hospital for elective surgery.

Sample Type : -

No. of Sample : -

Stage : -

Total RNA extraction and first-strand cDNA synthesis,Oligonucleotide microarray analysis,Design of oligonucleotide probes and EnCA preparationUp-regulation-These results suggest that S100B, TM4SF3, and OLFM4 overexpression may affect metastatic behavior of tumor cells in Taiwanese CRC patients.


Gene Details



NC_000003.11 (149192368..149221181)

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Gene Type protein coding
Gene Family -
Description The protein encoded by this gene is a member of the transmembrane 4 superfamily, also known as the tetraspanin family. Most of these members are cell-surface proteins that are characterized by the presence of four hydrophobic domains. The proteins mediate signal transduction events that play a role in the regulation of cell development, activation, growth and motility. This encoded protein is a cell surface glycoprotein that can regulate cell proliferation.[provided by RefSeq, Mar 2011]  
Chromosome 3
Location 3q25
Start 149192368  
End 149221181  
Strand +  
Gene Sequence

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Length 28814  
OMIM ID 606567   
HGNC ID HGNC:11856   
Unigene ID Hs.133527   
Ensembl ID ENSG00000169903   
PharmGKB ID PA36557   

mRNA Information


mRNA ID ?NM_004617.3
Exon join(1..471,1243..1332,13039..13175,24142..24331, 28096..28814)  
mRNA Sequence

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Length 1624  



CDS Information


   
Location298..906
CDS Sequence

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CCDS ID CCDS46932.1



Protein Information


      
Protein IDNP_004608.1
Protein Nametransmembrane 4 L six family member 4
Molecular Wt. (Da)174255
Protein Sequence

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Length 202  
Uniprot IDQ14145
Ensembl Protein ID ENSP00000171111  



Post-translational Modification Information (Source : HPRD)


No matching records could be found.

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

No matching records from HPRD source could be found.

Pathway Information


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Structure Information


No matching records could be found.

Domain Information




ID Location Description
pfam058051-186  L6_membrane
cl053991-186  L6_membrane superfamily


Ontology Information


   
HPRD ID5866
Molecular ClassIntegral membrane protein
Molecular FunctionReceptor signaling complex scaffold activity (GO:0030159)
Biological ProcessCell communication (GO:0007154); Signal transduction (GO:0007165)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO