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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
EIF4H 7458 Eukaryotic translation initiation factor 4H  7WSCR1; WBSCR1; eIF-4H 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
20089989   2010Cell line : -

Source : VU University Medical Center, Amsterdam, The Netherlands.

Sample Type : CRC tumor and normal tissue

No. of Sample : -

Stage : -

Biochemical isolation to nano-LC-MS/MS analysis Up-regulation--

20473909   2010Cell line : -

Source : Department of Frontier Surgery, Chiba University Hospital.

Sample Type : CRC tumor and normal tissue

No. of Sample : 10 patients with primary colorectal and 20 patients with esophageal cancer

Stage : -

real time RT-PCR, Western-blotting, Proliferation assays, Cell cycle analysis and TUNELUp-regulation-eIF4H isoform 1 plays an important role in carcinogenesis through the activation of oncogenic signaling and could be a promising molecular target for cancer therapy.


Gene Details



Chromosome: 7; NC_000007.13 (73588706..73611429)

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Gene Type protein coding
Gene Family RNA binding motif (RRM) containing
Description This gene encodes one of the translation initiation factors, which functions to stimulate the initiation of protein synthesis at the level of mRNA utilization. This gene is deleted in Williams syndrome, a multisystem developmental disorder caused by the deletion of contiguous genes at 7q11.23. Alternative splicing of this gene generates 2 transcript variants. [provided by RefSeq, Jul 2008]  
Chromosome 7
Location 7q11.23
Start 74174376  
End 74197101  
Strand +  
Gene Sequence

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Length 22726  
OMIM ID 603431   
HGNC ID HGNC:12741   
Unigene ID Hs.520943    
Ensembl ID ENSG00000106682   
PharmGKB ID -   

mRNA Information


mRNA ID NM_022170.1
Exon join(1..67,13236..13423,15298..15362,15447..15543, 15872..15931,20366..20503,20794..22724)  
mRNA Sequence

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Length 2546  



CDS Information


   
Locationjoin(9..67,13236..13423,15298..15362,15447..15543, 15872..15931,20366..20503,20794..20933)
CDS Sequence

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CCDS ID CCDS5564.1



Protein Information


      
Protein IDNP_071496.1
Protein NameEukaryotic translation initiation factor 4H
Molecular Wt. (Da)27254
Protein Sequence

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Length 248  
Uniprot IDO14641
Ensembl Protein ID ENSP00000005340  



Post-translational Modification Information (Source : HPRD)


Residue Type site
YPhosphorylation12
YPhosphorylation12
YPhosphorylation101;-
YPhosphorylation101;-
YPhosphorylation101;-
YPhosphorylation101;-
YPhosphorylation45;-
YPhosphorylation45;-
SPhosphorylation193
SPhosphorylation173
KAcetylation245
KAcetylation225
SPhosphorylation13
SPhosphorylation13
SPhosphorylation14
SPhosphorylation14
SPhosphorylation21
SPhosphorylation21
SPhosphorylation24
SPhosphorylation24
SPhosphorylation110
SPhosphorylation110

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

               
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
83638C11orf6812553NP_001129107.1yeast 2-hybrid16189514   


Pathway Information


No matching records could be found.

Structure Information


No matching records could be found.

Domain Information




ID Location Description
cd1240141-116  RRM_eIF4H
cl1716941-116  RRM_SF superfamily
cd1240241-116  RRM_eIF4B
cd1227243-114  RRM2_PHIP1
cd1239543-113  RRM2_RBM34
cd1239943-117  RRM_HP0827_like
cd1245043-119  RRM1_NUCLs
cd1240042-114  RRM_Nop6
cd1230645-113  RRM_II_PABPs
pfam0007645-112  RRM_1
cd0059045-114  RRM_SF
cd1239143-114  RRM1_SART3
cd1241145-114  RRM_ist3_like
cd1244845-114  RRM2_gar2
cd1239845-116  RRM_CSTF2_RNA15_like
cd1241343-119  RRM1_RBM28_like
cd1228445-113  RRM2_RBM23_RBM39
cd1227144-113  RRM1_PHIP1
cd1239241-117  RRM2_SART3
cd1223643-119  RRM_snRNP70
cd1241543-116  RRM3_RBM28_like
cd1228343-113  RRM1_RBM39_like
cd1237145-116  RRM2_PUF60
cd1231348-114  RRM1_RRM2_RBM5_like
cd1229845-113  RRM3_Prp24
cd1224045-114  RRM_NCBP2
cd1225445-113  RRM_hnRNPH_ESRPs_RBM12_like
cd1239745-117  RRM2_Nop13p_fungi
cd1267443-119  RRM1_Nop4p
cd1255045-113  RRM_II_PABPN1
cd1222543-113  RRM1_2_CID8_like
cd1267145-116  RRM_CSTF2_CSTF2T
cd1226043-113  RRM2_SREK1
cd1239343-116  RRM_ZCRB1
cd1244945-116  RRM_CIRBP_RBM3
cd1267045-113  RRM2_Nop12p_like
cd1236666-116  RRM1_RBM45
cd1238245-116  RRM_RBMX_like
cd1234745-113  RRM_PPIE
cd1245167-114  RRM2_NUCLs
cd1237045-113  RRM1_PUF60
cd1232945-99  RRM2_hnRNPD_like
cd1239443-114  RRM1_RBM34
cd1244743-116  RRM1_gar2
cd1255143-113  RRM_II_PABPN1L
cd1229743-115  RRM2_Prp24
cd1229143-106  RRM1_La
cd1231843-111  RRM5_RBM19_like
cd1223739-120  RRM_snRNP35
cd1237546-116  RRM1_Hu_like
cd1224243-113  RRM_SLIRP
cd1240443-114  RRM2_NCL
cd1261342-116  RRM2_NGR1_NAM8_like
cd1230745-113  RRM_NIFK_like
cd1237845-100  RRM1_I_PABPs
cd1265046-116  RRM1_Hu
cd1267642-99  RRM3_Nop4p
cd1223553-114  RRM_PPIL4
cd1234542-116  RRM2_SECp43_like
cd1256645-113  RRM2_MRD1
cd1229043-100  RRM1_LARP7
cd1251444-113  RRM4_RBM12_like
cd1234456-99  RRM1_SECp43_like
cd1232046-99  RRM6_RBM19_RRM5_MRD1
cd1240945-113  RRM1_RRT5
cd1255243-117  RRM_Nop15p
cd1236545-113  RRM_RNPS1
cd1231644-113  RRM3_RBM19_RRM2_MRD1
pfam1389367-116  RRM_5
cd1238945-117  RRM2_RAVER
cd1253445-116  RRM_SARFH
cd1235345-112  RRM2_TIA1_like
cd1237245-99  RRM_CFIm68_CFIm59
cd1232345-98  RRM2_MSI
pfam06273134-243  eIF-4B
cl05660134-243  eIF-4B superfamily
cd1239645-99  RRM1_Nop13p_fungi
cd1235443-90  RRM3_TIA1_like
cd1229646-115  RRM1_Prp24
cd1250249-113  RRM2_RMB19
cd1277046-116  RRM1_HuD
cd1236346-118  RRM_TRA2
cd1232845-99  RRM2_hnRNPA_like
cd1238445-99  RRM_RBM24_RBM38_like
cd1240846-117  RRM_eIF3G_like
cd1261742-116  RRM2_TIAR
cd1265666-113  RRM3_HuD
cd1277246-116  RRM1_HuC
cd1256140-101  RRM1_RBM5_like
cd1265466-113  RRM3_HuB
cd1277146-116  RRM1_HuB
cd1237645-100  RRM2_Hu_like
cd1265145-100  RRM2_SXL
cd1223145-113  RRM2_U2AF65
cd1258345-99  RRM2_hnRNPD
cd1251145-113  RRM2_RBM12_like
cd1236757-119  RRM2_RBM45
cd1241241-113  RRM_DAZL_BOULE
cd1224145-98  RRM_SF3B14
smart0036043-113  RRM
COG072437-121  RRM
pfam1425945-112  RRM_6
TIGR0162240-227  SF-CC1
TIGR0166146-116  ELAV_HUD_SF
TIGR0162243-120  SF-CC1
TIGR0162845-113  PABP-1234
TIGR0164545-113  half-pint
TIGR0164245-122  U2AF_lg
PRK14286153-185  PRK14286


Ontology Information


   
HPRD ID2693
Molecular ClassTranslation regulatory protein
Molecular FunctionTranscription factor activity (GO:0003700)
Biological ProcessRegulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism (GO:0019219)  



SNP Information


View SNP Geneview Report   

Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO