Search results:


General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
NUP214 8021 Nucleoporin 214kDa  9CAN; CAIN; N214; D9S46E 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
20089989   2010Cell line : -

Source : VU University Medical Center, Amsterdam, The Netherlands.

Sample Type : CRC tumor and normal tissue

No. of Sample : -

Stage : -

Biochemical isolation to nano-LC-MS/MS analysis Up-regulation-This genes are differenitially expressed between colorectal adenoma and Colorectal cancer tissue.

CRC tissue was collected at the VU University Medical Center, Amsterdam, The Netherlands.


Gene Details



Chromosome: 9; NC_000009.11 (134000981..134109091)

View Larger Image
   
Gene Type protein coding
Gene Family -
Description The nuclear pore complex is a massive structure that extends across the nuclear envelope, forming a gateway that regulates the flow of macromolecules between the nucleus and the cytoplasm. Nucleoporins are the main components of the nuclear pore complex in eukaryotic cells. This gene is a member of the FG-repeat-containing nucleoporins. The protein encoded by this gene is localized to the cytoplasmic face of the nuclear pore complex where it is required for proper cell cycle progression and nucleocytoplasmic transport. The 3' portion of this gene forms a fusion gene with the DEK gene on chromosome 6 in a t(6,9) translocation associated with acute myeloid leukemia and myelodysplastic syndrome. [provided by RefSeq, Jul 2008]  
Chromosome 9
Location 9q34.1
Start 131124959  
End 131234670  
Strand -  
Gene Sequence

   Download   Select all

Length 109712  
OMIM ID 114350   
HGNC ID HGNC:8064   
Unigene ID Hs.654530    
Ensembl ID ENSG00000126883   
PharmGKB ID -   

mRNA Information


mRNA ID XM_005272216.2
Exon join(1..791,2566..2761,3374..3525,4321..4519,5808..5878, 7638..7701,8148..8251,9940..10046,10982..11048, 14323..14449,15591..15752,19322..19796,21171..21346, 22529..22626,25366..25452,25658..25807,26778..26936, 34425..34528,38033..38215,38912..38997,39103..39186, 49097..49360,50502..50663,53353..53452,62331..62406, 64095..64173,67250..67334,70275..70336,72258..74057, 76689..76759,90254..90410,97820..97972,103202..103373, 105672..105811,107326..107350,108496..109705)  
mRNA Sequence

   Download   Select all

Length 8198  



CDS Information


   
Location join(624..791,2566..2761,3374..3525,4321..4519,5808..5878, 7638..7701,8148..8251,9940..10046,10982..11048, 14323..14449,15591..15752,19322..19796,21171..21346, 22529..22626,25366..25452,25658..25807,26778..26936, 34425..34528,38033..38215,38912..38997,39103..39186, 49097..49360,50502..50663,53353..53452,62331..62406, 64095..64173,67250..67334,70275..70336,72258..74057,
CDS Sequence

   Download   Select all

CCDS ID -



Protein Information


      
Protein IDNP_005076.3
Protein NameNucleoporin 214kDa
Molecular Wt. (Da)213489
Protein Sequence

   Download   Select all

Length 2090  
Uniprot IDQ01094
Ensembl Protein ID ENSP00000345571  



Post-translational Modification Information (Source : HPRD)


Residue Type site
SPhosphorylation430
TPhosphorylation437
SPhosphorylation1023;-
SPhosphorylation940;-
SPhosphorylation986;-
TPhosphorylation987;-
SPhosphorylation988;-
SPhosphorylation989;-
SPhosphorylation993;-
SPhosphorylation991;-
SPhosphorylation433
TPhosphorylation439
TPhosphorylation434
TPhosphorylation436
SPhosphorylation440
SPhosphorylation1081
SPhosphorylation656
SPhosphorylation666
SPhosphorylation657
TPhosphorylation670
SPhosphorylation678
SPhosphorylation970
SPhosphorylation974
SPhosphorylation985
TPhosphorylation1021
SPhosphorylation1045
SPhosphorylation1056
SPhosphorylation1136
SPhosphorylation1963
TPhosphorylation1203
SPhosphorylation441
SPhosphorylation651
SPhosphorylation655
SPhosphorylation40
KAcetylation143
SPhosphorylation648
TPhosphorylation1150
TPhosphorylation1156
TPhosphorylation1355
SPhosphorylation1356
SPhosphorylation766
SPhosphorylation610
SPhosphorylation461
TPhosphorylation1312
SPhosphorylation1333
SPhosphorylation1181
SPhosphorylation1185
SPhosphorylation1044
TPhosphorylation416
SPhosphorylation646
SPhosphorylation613
SPhosphorylation1038
SPhosphorylation1936
SPhosphorylation1083
TPhosphorylation956
SPhosphorylation968
TGlycosylation580
SGlycosylation1056
TGlycosylation1201
SGlycosylation1354
SPhosphorylation39
SPhosphorylation45
SPhosphorylation792
SPhosphorylation961
TPhosphorylation962
TPhosphorylation1051
TPhosphorylation1055
SPhosphorylation1978
SPhosphorylation1985
SPhosphorylation2002
TPhosphorylation1981
SPhosphorylation450
TPhosphorylation1134
SPhosphorylation1211
SPhosphorylation1217
TPhosphorylation1229
TPhosphorylation1243
YPhosphorylation1145
SPhosphorylation1146

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                              
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
4088SMAD34380NP_005893.1in vitro12917407   
4089SMAD42995NP_005350.1in vitro12917407   


Pathway Information


            
Pathway Name Pathway ID
Epstein-Barr virus infection hsa05169
RNA transport hsa03013


Structure Information


No matching records could be found.

Domain Information




ID Location Description
cd0020094-265  WD40
cl0256794-265  WD40 superfamily
cd0020094-216  WD40
COG43711904-2022  COG4371
cl018071904-2022  DUF1517 superfamily
pfam15087555-671  DUF4551
cl20957555-671  DUF4551 superfamily
TIGR021361598-1674  ptsS_2
cl214561598-1674  Periplasmic_Binding_Protein_Type_2 superfamily
PRK07003512-689  PRK07003
PHA032471033-1712  PHA03247
PRK07994559-704  PRK07994
PRK070031509-1707  PRK07003
PHA032471230-1719  PHA03247
PRK07003474-688  PRK07003
PHA032471263-1763  PHA03247
pfam15402559-684  Spc7_N
pfam051091146-1486  Herpes_BLLF1
PRK14951561-747  PRK14951
pfam051091088-1426  Herpes_BLLF1
PHA03247560-687  PHA03247
PLN022171236-1313  PLN02217
pfam04621568-692  ETS_PEA3_N
PHA03247472-704  PHA03247
PRK070031461-1711  PRK07003
PHA03247408-687  PHA03247
PRK12323558-707  PRK12323
PHA03247425-680  PHA03247
PRK108561521-1632  PRK10856
PRK108111496-1702  rne
PHA03247424-674  PHA03247
PRK149511491-1616  PRK14951
PRK123231478-1685  PRK12323
pfam03154558-694  Atrophin-1
pfam051091277-1671  Herpes_BLLF1
PRK149511527-1634  PRK14951
PRK119071339-1419  PRK11907
PHA032551584-1725  PHA03255
PRK077641540-1719  PRK07764
PHA033071483-1712  PHA03307
PHA03307416-690  PHA03307
PRK149591169-1300  PRK14959
PRK070031545-1718  PRK07003
PHA03247427-705  PHA03247
PRK123231506-1719  PRK12323
PHA032551558-1714  PHA03255
pfam04652577-692  DUF605
PTZ004361512-1656  PTZ00436
PRK02224708-886  PRK02224
PTZ00449497-691  PTZ00449
PRK077641555-1712  PRK07764
PHA033071000-1338  PHA03307
PRK108561596-1706  PRK10856
PRK03427599-692  PRK03427
PHA032551546-1685  PHA03255
PRK149511504-1632  PRK14951
PHA033771483-1672  PHA03377
PTZ004361488-1634  PTZ00436
PRK108111527-1668  rne
PRK101181497-1711  PRK10118
PRK079941478-1615  PRK07994
PRK149491262-1669  PRK14949
PRK108561520-1644  PRK10856
PRK077641565-1685  PRK07764
PHA03307405-683  PHA03307
COG52811909-2051  COG5281
PRK108111518-1718  rne
PRK14950595-722  PRK14950
pfam097261137-1314  Macoilin
PRK07764511-690  PRK07764
PRK070031558-1718  PRK07003
pfam03154523-682  Atrophin-1
COG1196806-896  Smc
PRK119071557-1676  PRK11907
PRK07764474-679  PRK07764


Ontology Information


   
HPRD ID2983
Molecular ClassTransport/cargo protein
Molecular FunctionTranscription factor activity (GO:0003700)
Biological ProcessRegulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism (GO:0019219)  



SNP Information


View SNP Geneview Report   

Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO