Search results:
General Information
| Gene_Symbol | Gene_ID | Gene_Name | Chromosome | Alias |
|---|---|---|---|---|
| BRIP1 | 83990 | BRCA1 interacting protein C-terminal helicase 1  | 17 | OF, BACH1, FANCJ  |
- Evidence
- Gene
- mRNA
- CDS
- Protein
- PTM
- Enzyme
- PPi
- Pathway
- Structural
- Domain
- Ontology
- SNP
- Drug
- External Links
Evidence Information
| Pubmed ID | Year | Sample Information | Techniques | Mechanism | Fold Change | Remark |
|---|---|---|---|---|---|---|
| 22526901    | 2012 | Cell line : - Source : - Sample Type : CRC tissue and blood sample No. of Sample : 219 patients with CRC. Stage : - | Immunohistochemistry | Up-regulation | - | FANCJ could be a useful biomarker to predict the response to 5-FU and prognosis of CRC, particularly in tumors with normal MLH1 expression. FANCJ expression was elevated in tumor tissues compared with normal epithelial tissue. High expression of FANCJ was significantly associated with 5-FU resistance measured by the SDI test (P < 0.05) and poor recurrence-free survival (RFS) (P < 0.05). |
Gene Details

| Gene Type | protein coding |
|---|---|
| Gene Family | Fanconi anemia, complementation groups |
| Description | The protein encoded by this gene is a member of the RecQ DEAH helicase family and interacts with the BRCT repeats of breast cancer, type 1 (BRCA1). The bound complex is important in the normal double-strand break repair function of breast cancer, type 1 (BRCA1). This gene may be a target of germline cancer-inducing mutations.   |
| Chromosome | 17 |
| Location | 17q22.2 |
| Start | 61679186   |
| End | 61863937   |
| Strand | -   |
| Gene Sequence |    Download   Select all |
| Length | 184752   |
| OMIM ID | 605882    |
| HGNC ID | HGNC:20473    |
| Unigene ID | Hs.128903    |
| Ensembl ID | ENSG00000136492    |
| PharmGKB ID | -    |
mRNA Information
| mRNA ID | NM_032043.2 |
|---|---|
| Exon | join(379..654,2369..2491,4031..4142,6707..6880, 14682..14809,16718..16837,55181..55471,62464..62685, 64639..64838,70209..70341,79514..79668,82933..83098, 83537..83677,87376..87537,119347..119506,120804..120925, 147875..147987,170426..170508,177773..178102, 179798..184752)   | mRNA Sequence |    Download   Select all |
| Length | 8166   |
CDS Information
| Location | join(2399..2491,4031..4142,6707..6880,14682..14809, 16718..16837,55181..55471,62464..62685,64639..64838, 70209..70341,79514..79668,82933..83098,87376..87537, 119347..119506,120804..120925,147875..147987, 170426..170508,177773..178102,179798..180642) |
|---|---|
| CDS Sequence |    Download   Select all |
| CCDS ID | - |    
Protein Information
| Protein ID | NP_114432.2 |
|---|---|
| Protein Name | BRCA1 interacting protein C-terminal helicase 1 |
| Molecular Wt. (Da) | 140737 |
| Protein Sequence |    Download   Select all |
| Length | 1249   |
| Uniprot ID | P49917 |    
| Ensembl Protein ID | ENSP00000349393   |    
Post-translational Modification Information (Source : HPRD)
| Residue | Type | site |
|---|---|---|
| S | Phosphorylation | 1032 |
| Y | Phosphorylation | 916 |
| S | Phosphorylation | 930 |
| T | Phosphorylation | 918 |
| Y | Phosphorylation | 921 |
| S | Phosphorylation | 927 |
| S | Phosphorylation | 990 |
| S | Phosphorylation | 77 |
| T | Phosphorylation | 584 |
| S | Phosphorylation | 1237 |
| S | Phosphorylation | 542 |
| S | Phosphorylation | 956 |
| Y | Phosphorylation | 1011 |
| T | Phosphorylation | 1013 |
| S | Phosphorylation | 961 |
| S | Phosphorylation | 964 |
Enzyme Information
| EC | 3.6.4.12 |    
|---|---|
| Name | DNA helicase 3' to 5' DNA helicase 3'-5' DNA helicase 3'-5' PfDH 5' to 3' DNA helicase AvDH1 BACH1 helicase BcMCM BLM protein BRCA1-associated C-terminal helicase CeWRN-1 Dbp9p DmRECQ5 DNA helicase 120 DNA helicase A DNA helicase E DNA helicase II DNA helicase III DNA helicase RECQL5beta DNA helicase VI dnaB DnaB helicase E1 helicase HDH IV Hel E helicase DnaB helicase domain of bacteriophage T7 gene 4 protein helicase PcrA helicase UvrD hHcsA Hmi1p hPif1 MCM helicase MCM protein MER3 helicase MER3 protein MPH1 PcrA PcrA helicase PDH120 PfDH A Pfh1p PIF1 |
| Class | Hydrolases; Acting on acid anhydrides; Acting on acid anhydrides to facilitate cellular and subcellular movement |
| Sysname | ATP phosphohydrolase (DNA helix unwinding)   |
| Substrate | ATP [CPD:C00002]; H2O   |
| Product | ADP [CPD:C00008]; phosphate   |
| Reaction (IUBMB) | ![]() |
PPi Information
(Click to view network : Source STRING)      View   
| Interactant Gene ID (Source: HPRD) | Gene Symbol | HPRD ID | Ref Seq ID | Technique | References |
|---|---|---|---|---|---|
| 672 |    BRCA1 |    218 |    NP_009231.2 |    in vitro;in vivo |    113   010   101   524   259   000   000   000    |
Pathway Information
| Pathway Name | Pathway ID |
|---|---|
| Fanconi anemia pathway |    hsa03460 |    
Structure Information
No matching records could be found.
Domain Information
| ID | Location | Description |
|---|---|---|
| pfam06733 | 248-415  | DEAD_2 |
| cl21455 | 248-415  | P-loop_NTPase superfamily |
| pfam13307 | 680-865  | Helicase_C_2 |
| cl21455 | 680-865  | P-loop_NTPase superfamily |
| smart00488 | 15-427  | DEXDc2 |
| smart00491 | 698-849  | HELICc2 |
| TIGR00604 | 245-881  | rad3 |
| COG1199 | 238-887  | DinG |
| TIGR01407 | 606-884  | dinG_rel |
| PRK08074 | 18-61  | PRK08074 |
| TIGR01407 | 23-71  | dinG_rel |
| smart00487 | 13-72  | DEXDc |
| PRK11747 | 350-425  | dinG |
Ontology Information
| HPRD ID | 3585 |    
|---|---|
| Molecular Class | Cytoskeletal associated protein |
| Molecular Function | Protein serine/threonine kinase activity (GO:0004674) |
| Biological Process | Cell communication (GO:0007154); Signal transduction (GO:0007165)   |
Drug Information
No matching records could be found.
External Links
| ArrayExpress | GO |    
|---|---|
| ICGC | GO |    
| Cancer3D | GO |    
| COSMIC | GO |    
| NCG | GO |    
| TSGene | GO |    
| Tumor Gene Family of Databases | GO |    
| CCDB | GO |    
| G2SBC | GO |    
| Osteosarcoma Database | GO |    
| RCDB | GO |    

