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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
SOCS2 8835 suppressor of cytokine signaling 2  12STATI2, SSI2, SOCS-2, SSI-2, CIS2, Cish2 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
20348236   2010Cell line : -

Source : -

Sample Type : -

No. of Sample : -

Stage : -

Immunohistochemistry, Plasma IGF-I Assay,real time RT-PCR,Immunoblotting, Western Blotting Down-regulation-Reduced expression or epigenetic silencing of SOCS2 may serve as a useful biomarker for colorectal cancer risk.


Gene Details



Chromosome 12 - NC_000012.12 (93569822..93626236)

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Gene Type protein coding
Gene Family Suppressors of cytokine signaling, "SH2 domain containing"
Description This gene encodes a member of the suppressor of cytokine signaling (SOCS) family. SOCS family members are cytokine-inducible negative regulators of cytokine receptor signaling via the Janus kinase/signal transducer and activation of transcription pathway (the JAK/STAT pathway). SOCS family proteins interact with major molecules of signaling complexes to block further signal transduction, in part, by proteasomal depletion of receptors or signal-transducing proteins via ubiquitination. The expression of this gene can be induced by a subset of cytokines, including erythropoietin, GM-CSF, IL10, interferon (IFN)-gamma and by cytokine receptors such as growth horomone receptor. The protein encoded by this gene interacts with the cytoplasmic domain of insulin-like growth factor-1 receptor (IGF1R) and is thought to be involved in the regulation of IGF1R mediated cell signaling. This gene has pseudogenes on chromosomes 20 and 22. Alternative splicing results in multiple transcript variants.  
Chromosome 12
Location 12q
Start 93569822  
End 93626236  
Strand +  
Gene Sequence

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Length 56415  
OMIM ID 605117   
HGNC ID HGNC:19382   
Unigene ID Hs.485572   
Ensembl ID ENSG00000120833   
PharmGKB ID -   

mRNA Information


mRNA ID NM_003877.4
Exon join(1..377,2864..3215,4901..6924)  
mRNA Sequence

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Length 2649  



CDS Information


   
Locationjoin(3077..3215,4901..5352,56353..56400)
CDS Sequence

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CCDS ID -



Protein Information


      
Protein IDNP_001257396.1
Protein Namesuppressor of cytokine signaling 2
Molecular Wt. (Da)22041
Protein Sequence

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Length 198  
Uniprot IDP12268
Ensembl Protein ID ENSP00000321584  



Post-translational Modification Information (Source : HPRD)


No matching records could be found.

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                                                            
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
2057EPOR587NP_000112.1in vitro;yeast 2-hybrid1   178   157   315   644   410   
2690GHR2971NP_000154.1in vitro;in vivo10585430   
3480IGF1R932NP_000866.1in vitro;in vivo9727029   
5618PRLR1457NP_000940.1in vitro;in vivo104   551   129   202   403   


Pathway Information


                        
Pathway Name Pathway ID
Insulin signaling pathway hsa04910
Jak-STAT signaling pathway hsa04630
Prolactin signaling pathway hsa04917
Type II diabetes mellitus hsa04930


Structure Information


No matching records could be found.

Domain Information




ID Location Description
cd1038340-142  SH2_SOCS2
cl1525540-142  SH2 superfamily
cd03736158-198  SOCS_SOCS2
cl02533158-198  SOCS superfamily
cd1071843-130  SH2_CIS
cd0992347-130  SH2_SOCS_family
cd1038238-134  SH2_SOCS1
cd1038439-133  SH2_SOCS3
cd1038737-139  SH2_SOCS6
smart0025248-131  SH2
cd1038839-137  SH2_SOCS7
cd0994241-129  SH2_nSH2_p85_like
cd0017348-129  SH2
cd03717158-194  SOCS_SOCS_like
smart00969161-194  SOCS_box
cd03734158-198  SOCS_CIS1
cd03587159-194  SOCS
smart00253154-194  SOCS
pfam0001748-129  SH2
pfam07525161-191  SOCS_box
cd0994048-129  SH2_Vav_family
cd1038540-108  SH2_SOCS4
cd1040946-156  SH2_Nck2
cd03716161-191  SOCS_ASB_like
cd1038649-108  SH2_SOCS5
cd1035640-110  SH2_ShkA_ShkC
cd1039148-156  SH2_SHE
cd0993148-158  SH2_C-SH2_SHP_like
cd1035249-131  SH2_a2chimerin_b2chimerin
cd0993248-129  SH2_C-SH2_PLC_gamma_like
cd0993748-129  SH2_csk_like
cd1040848-156  SH2_Nck1
cd0994547-156  SH2_SHB_SHD_SHE_SHF_like
cd1035748-101  SH2_ShkD_ShkE
cd0992648-85  SH2_CRK_like
cd03739162-197  SOCS_SOCS5
cd1039248-156  SH2_SHF
cd0992541-131  SH2_SHC
cd0992948-132  SH2_BLNK_SLP-76
cd0993448-129  SH2_Tec_family
cd03741162-193  SOCS_SOCS7
cd03738162-197  SOCS_SOCS4
cd03730158-194  SOCS_ASB14
cd1034848-131  SH2_Cterm_shark_like
cd03723162-191  SOCS_ASB4_ASB18
cd03733159-191  SOCS_WSB_SWIP
cd1040648-129  SH2_Vav2
cd0994148-129  SH2_Grb2_like
cd1036148-132  SH2_Fps_family
cd1040548-131  SH2_Vav1
cd1038948-156  SH2_SHB
cd03746159-191  SOCS_WSB1_SWIP1
cd0994348-129  SH2_Nck_family
cd1040748-129  SH2_Vav3
cd0993048-87  SH2_cSH2_p85_like
cd1036548-131  SH2_Src_Src
cd03740162-196  SOCS_SOCS6
cd1034157-132  SH2_N-SH2_PLC_gamma_like
cd03737158-194  SOCS_SOCS3
cd1033741-130  SH2_BCAR3
cd03722159-191  SOCS_ASB3
cd0991853-91  SH2_Nterm_SPT6_like
cd1039848-129  SH2_Tec_Txk
cd1035448-98  SH2_Cterm_RasGAP
cd0993348-84  SH2_Src_family
cd03725158-191  SOCS_ASB6
cd0992748-101  SH2_Tensin_like
cd03729162-191  SOCS_ASB13
cd1036948-129  SH2_Src_Frk
cd03745161-191  SOCS_WSB2_SWIP2
cd1037048-84  SH2_Src_Src42
cd0993548-129  SH2_ABL
cd1039748-91  SH2_Tec_Btk
cd1038051-129  SH2_Jak3
cd1034748-84  SH2_Nterm_shark_like
cd1039643-91  SH2_Tec_Itk
cd0991929-75  SH2_STAT_family


Ontology Information


   
HPRD ID935
Molecular ClassAdapter molecule
Molecular FunctionCatalytic activity (GO:0003824)
Biological ProcessMetabolism (GO:0008152); Energy pathways (GO:0006091)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO