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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
HS6ST2 90161 heparan sulfate 6-O-sulfotransferase 2  X- 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
24649258   2013Cell line : -

Source : Kinki University Hospital.

Sample Type : Formalin-fixed, paraffin-embedded tissues

No. of Sample : 102

Stage : -

Immunohistochemistry, RT-PCR,microarray Up-regulation37 FoldThese findings indicate that HS6ST2 may be a novel cancer-related marker that may provide insight into the glycobiology of CRC.


Gene Details



NC_000023.10 (131760038..132095423, complement)

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Gene Type protein coding
Gene Family Sulfotransferases, membrane-bound
Description Heparan sulfate proteoglycans are ubiquitous components of the cell surface, extracellular matrix, and basement membranes, and interact with various ligands to influence cell growth, differentiation, adhesion, and migration. This gene encodes a member of the heparan sulfate (HS) sulfotransferase gene family, which catalyze the transfer of sulfate to HS. Different family members and isoforms are thought to synthesize heparan sulfates with tissue-specific structures and functions. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]  
Chromosome X
Location Xq26.2
Start 131760038  
End 132095423  
Strand -  
Gene Sequence

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Length 335386  
OMIM ID 300545   
HGNC ID HGNC:19133   
Unigene ID Hs.385956   
Ensembl ID ENSG00000171004   
PharmGKB ID PA134950831   

mRNA Information


mRNA ID ?NM_001077188.1
Exon  
mRNA Sequence

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Length  



CDS Information


   
Location
CDS Sequence

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CCDS ID CCDS48169.1



Protein Information


      
Protein IDNP_001070656.1
Protein Nameheparan sulfate 6-O-sulfotransferase 2
Molecular Wt. (Da)0
Protein Sequence

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Length 605  
Uniprot IDQ96PB8
Ensembl Protein ID ENSP00000379880  



Post-translational Modification Information (Source : HPRD)


No matching records could be found.

Enzyme Information


No matching records could be found.

PPi Information


No STRING Network could be found.

No matching records from HPRD source could be found.

Pathway Information


      
Pathway Name Pathway ID
Glycosaminoglycan biosynthesis - heparan sulfate / heparin hsa00534


Structure Information


No matching records could be found.

Domain Information




ID Location Description
pfam03567225-490  Sulfotransfer_2
cl22970225-490  Sulfotransfer_2 superfamily


Ontology Information


   
HPRD ID10571
Molecular ClassEnzyme: Sulphotransferase
Molecular FunctionPhosphatase regulator activity (GO:0019208)
Biological ProcessBiological_process unknown (GO:0000004)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO