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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
TM4SF5 9032 transmembrane 4 L six family member 5  17- 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
25268742   2014Cell line : HT 29

Source : -

Sample Type : CRC tumor and normal tissues

No. of Sample : 45

Stage : -

ImmunohistochemistryUp-regulation- TM4SF5-specific monoclonal antibody has a therapeutic effect against colon cancer.


Gene Details



NC_000017.10 (4675187..4686506)

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Gene Type protein coding
Gene Family -
Description The protein encoded by this gene is a member of the transmembrane 4 superfamily, also known as the tetraspanin family. Most of these members are cell-surface proteins that are characterized by the presence of four hydrophobic domains. The proteins mediate signal transduction events that play a role in the regulation of cell development, activation, growth and motility. This encoded protein is a cell surface glycoprotein and is highly similar in sequence and structure to transmembrane 4 superfamily member 1. It may play a role in cell proliferation, and overexpression of this protein may be associated with the uncontrolled growth of tumour cells. [provided by RefSeq, Jul 2008]  
Chromosome 17
Location 17p13.3
Start 4675187  
End 4686506  
Strand +  
Gene Sequence

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Length 11320  
OMIM ID 604657   
HGNC ID HGNC:11857   
Unigene ID Hs.184194   
Ensembl ID ENSG00000142484   
PharmGKB ID PA36558   

mRNA Information


mRNA ID ?NM_003963.2
Exon  
mRNA Sequence

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Length  



CDS Information


   
Location
CDS Sequence

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CCDS ID CCDS11054.1



Protein Information


      
Protein IDNP_003954.2
Protein Nametransmembrane 4 L six family member 5
Molecular Wt. (Da)0
Protein Sequence

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Length 197  
Uniprot IDO43482
Ensembl Protein ID ENSP00000220514  



Post-translational Modification Information (Source : HPRD)


No matching records could be found.

Enzyme Information


No matching records could be found.

PPi Information


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No matching records from HPRD source could be found.

Pathway Information


No matching records could be found.

Structure Information


No matching records could be found.

Domain Information




ID Location Description
pfam058051-191  L6_membrane
cl053991-191  L6_membrane superfamily


Ontology Information


   
HPRD ID16719
Molecular ClassIntegral membrane protein
Molecular FunctionVoltage-gated ion channel activity (GO:0005244)
Biological ProcessTransport (GO:0006810)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO