Search results:


General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
REPS2 9185 RALBP1 associated Eps domain containing 2  XPOB1 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
25788273   2015Cell line : SW480 ADH, DLD 1, RKO

Source : Fundacin Jimnez Daz Biobank.

Sample Type : Formalin-fixed paraffin-embedded tissue

No. of Sample : Colon control 16 and small intestine 16, colorectal adenoma 76 and mCRC 699

Stage : -

Immunofluorescence, immunohistochemical and confocal microscopy analyses of human tissues and cultured cells,Western blotting,ChIP-sequencing assay.Up-regulation-Overexpression of ALDH1A1 and REPS2 associates with nuclear DKK-1 expression in tumors and correlates with decreased OS (P = 0.001 and 0.014) and PFS.


Gene Details



NC_000023.10 (16964814..17171403)

View Larger Image
   
Gene Type protein coding
Gene Family EF-hand domain containing
Description The product of this gene is part of a protein complex that regulates the endocytosis of growth factor receptors. The encoded protein directly interacts with a GTPase activating protein that functions downstream of the small G protein Ral. Its expression can negatively affect receptor internalization and inhibit growth factor signaling. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]  
Chromosome X
Location Xp22.2
Start 16964814  
End 17171403  
Strand +  
Gene Sequence

   Download   Select all

Length 206590  
OMIM ID 300317   
HGNC ID HGNC:9963   
Unigene ID Hs.186810   
Ensembl ID ENSG00000169891   
PharmGKB ID PA34330   

mRNA Information


mRNA ID ?NM_001080975.1
Exon  
mRNA Sequence

   Download   Select all

Length  



CDS Information


   
Location
CDS Sequence

   Download   Select all

CCDS ID CCDS14180.2



Protein Information


      
Protein IDNP_001074444.1
Protein NameRALBP1 associated Eps domain containing 2
Molecular Wt. (Da)0
Protein Sequence

   Download   Select all

Length 660  
Uniprot IDQ8TEY7
Ensembl Protein ID ENSP00000350009  



Post-translational Modification Information (Source : HPRD)


Residue Type site
SPhosphorylation121
SPhosphorylation121
SPhosphorylation121
YPhosphorylation558
YPhosphorylation558
YPhosphorylation557
SPhosphorylation254
SPhosphorylation254
SPhosphorylation253

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                                                            
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
2885GRB2150NP_002077.1in vitro;in vivo9422736   
5899RALB1550NP_002872.1in vitro9422736   
5970RELA1241NP_068810.3yeast 2-hybrid15184881   
55755CDK5RAP29740NP_060719.4yeast 2-hybrid15184881   


Pathway Information


No matching records could be found.

Structure Information


No matching records could be found.

Domain Information




ID Location Description
cd00052286-352  EH
cl08302286-352  EFh superfamily
pfam12763274-367  EF-hand_4
cl22916274-367  EF-hand_4 superfamily
cd0005275-121  EH
cl0830275-121  EFh superfamily
smart00027275-370  EH
smart0002775-125  EH
PTZ00108393-639  PTZ00108


Ontology Information


   
HPRD ID5624
Molecular ClassCalcium binding protein
Molecular FunctionTranscription factor activity (GO:0003700)
Biological ProcessRegulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism (GO:0019219)  



SNP Information


View SNP Geneview Report   

Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO