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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
GTF3C4 9329 General transcription factor IIIC, polypeptide 4, 90kDa  9KAT12; TFIII90; TFIIIC90; TFIIIC290; TFIIICDELTA 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
22968445   2012Cell line : -

Source : Department of Pathology of Wrocaw Medical University

Sample Type : -

No. of Sample : -

Stage : TNM Stage II

Laser capture microdissection,FFPE-FASP,SAX fractionation,LC-MSMS,Label-free quantitation.Up-regulation3.4-


Gene Details



Chromosome: 9; NC_000009.11 (135545728..135565471)

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Gene Type protein coding
Gene Family Chromatin-modifying enzymes / K-acetyltransferases, General transcription factors
Description -  
Chromosome 9
Location 9q34.13
Start 132670035  
End 132690084  
Strand +  
Gene Sequence

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Length 20050  
OMIM ID 604892   
HGNC ID HGNC:4667   
Unigene ID Hs.656646    
Ensembl ID ENSG00000125484   
PharmGKB ID -   

mRNA Information


mRNA ID XM_005272206.2
Exon complement(<1..363)  
mRNA Sequence

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Length 3866  



CDS Information


   
Locationcomplement(<1..215)
CDS Sequence

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CCDS ID -



Protein Information


      
Protein IDNP_036336.2
Protein NameGeneral transcription factor IIIC, polypeptide 4, 90kDa
Molecular Wt. (Da)91852
Protein Sequence

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Length 822  
Uniprot IDQ14247
Ensembl Protein ID ENSP00000301843  



Post-translational Modification Information (Source : HPRD)


Residue Type site
SPhosphorylation611;-
SPhosphorylation604
SPhosphorylation652
TPhosphorylation571

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                                                            
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
2972BRF15361NP_001510.2in vitro;in vivo10523658   
2975GTF3C17540NP_001511.2in vitro;in vivo10523658   
2976GTF3C25347NP_001512.1in vitro;in vivo10523658   
8290HIST3H34156NP_003484.1in vitro10523658   


Pathway Information


No matching records could be found.

Structure Information


No matching records could be found.

Domain Information




ID Location Description
pfam1265761-254  TFIIIC_delta
cl2046061-254  TFIIIC_delta superfamily
pfam12660736-822  zf-TFIIIC
cl15018736-822  zf-TFIIIC superfamily


Ontology Information


   
HPRD ID4078
Molecular ClassTranscription factor
Molecular FunctionTranscription regulator activity (GO:0030528)
Biological ProcessRegulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism (GO:0019219)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO