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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
AKAP12 9590 A kinase (PRKA) anchor protein 12  6AKAP250, SSeCKS 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
20364105   2010Cell line : -

Source : -

Sample Type : CRC tumor and normal tissue

No. of Sample : 45

Stage : TNM Stage I-III

Biochemical isolation to nano-LC-MS/MS analysis Methylation-AKAP12 methylation represents a potential molecular biomarker for predicting the malignancy of this cancer.

Methylation (>1%) of the AKAP12 promoter region was present in 35 of 45 (77.8%) carcinoma tissue samples and 6 of 45 (13.3%) adjacent tissue samples.


Gene Details



Chromosome 6 - NC_000006.12 (151239999..151358559)

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Gene Type protein coding
Gene Family A-kinase anchor proteins
Description The A-kinase anchor proteins (AKAPs) are a group of structurally diverse proteins, which have the common function of binding to the regulatory subunit of protein kinase A (PKA) and confining the holoenzyme to discrete locations within the cell. This gene encodes a member of the AKAP family. The encoded protein is expressed in endothelial cells, cultured fibroblasts, and osteosarcoma cells. It associates with protein kinases A and C and phosphatase, and serves as a scaffold protein in signal transduction. This protein and RII PKA colocalize at the cell periphery. This protein is a cell growth-related protein. Antibodies to this protein can be produced by patients with myasthenia gravis. Alternative splicing of this gene results in two transcript variants encoding different isoforms.  
Chromosome 6
Location 6q24-q25
Start 151239999  
End 151358559  
Strand +  
Gene Sequence

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Length 118561  
OMIM ID 604698   
HGNC ID HGNC:370   
Unigene ID Hs.371240   
Ensembl ID ENSG00000131016   
PharmGKB ID -   

mRNA Information


mRNA ID NM_005100.3
Exon join(1..61,386..726,65749..65905,108713..113754, 115729..118561)  
mRNA Sequence

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Length 8450  



CDS Information


   
Locationjoin(565..726,65749..65905,108713..113742)
CDS Sequence

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CCDS ID CCDS5229.1



Protein Information


      
Protein IDNP_005091.2
Protein NameA kinase (PRKA) anchor protein 12
Molecular Wt. (Da)191351
Protein Sequence

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Length 1782  
Uniprot IDP60228
Ensembl Protein ID ENSP00000220849  



Post-translational Modification Information (Source : HPRD)


Residue Type site
SPhosphorylation598
SPhosphorylation500
SPhosphorylation612;-
SPhosphorylation514;-
TPhosphorylation608;-
TPhosphorylation510;-
SPhosphorylation598;-
SPhosphorylation500;-
SPhosphorylation627;-
SPhosphorylation529;-
SPhosphorylation286;-
SPhosphorylation188;-
SPhosphorylation1331;-
SPhosphorylation1233;-
SPhosphorylation629;-
SPhosphorylation531;-
TPhosphorylation285;-
TPhosphorylation187;-
SPhosphorylation651;-
SPhosphorylation553;-
SPhosphorylation645;-
SPhosphorylation547;-
SPhosphorylation887;-
SPhosphorylation789;-
SPhosphorylation732;-
SPhosphorylation634;-
SPhosphorylation388;-
SPhosphorylation290;-
SPhosphorylation505;-
SPhosphorylation407;-
SPhosphorylation698;-
SPhosphorylation600;-
SPhosphorylation640;-
TPhosphorylation642;-
TPhosphorylation646;-
TPhosphorylation544;-
TPhosphorylation548;-
SPhosphorylation542;-
SPhosphorylation280;-
SPhosphorylation283;-
SPhosphorylation185;-
SPhosphorylation182;-
TPhosphorylation904;-
TPhosphorylation806;-
SPhosphorylation910;-
SPhosphorylation812;-
SPhosphorylation1390;-
SPhosphorylation1391;-
SPhosphorylation1292;-
SPhosphorylation1293;-
SPhosphorylation568;-
SPhosphorylation569;-
SPhosphorylation565;-
SPhosphorylation566;-
SPhosphorylation467;-
SPhosphorylation468;-
SPhosphorylation470;-
SPhosphorylation471;-
TPhosphorylation311;-
TPhosphorylation213;-
SPhosphorylation312;-
SPhosphorylation214;-
YPhosphorylation374;-
YPhosphorylation276;-
SPhosphorylation644;-
SPhosphorylation546;-
TPhosphorylation649;-
TPhosphorylation551;-
SPhosphorylation697;-
SPhosphorylation599;-
SPhosphorylation1395
SPhosphorylation1297
TPhosphorylation1760
TPhosphorylation1662
SPhosphorylation483
SPhosphorylation385
SPhosphorylation554
SPhosphorylation456
SPhosphorylation557
SPhosphorylation459
SPhosphorylation381
SPhosphorylation283
TPhosphorylation1116
TPhosphorylation1018
TPhosphorylation289
TPhosphorylation191
SPhosphorylation253
SPhosphorylation155
TPhosphorylation1264
TPhosphorylation1166
SPhosphorylation696
SPhosphorylation598
SPhosphorylation227
SPhosphorylation129
SPhosphorylation1119
SPhosphorylation1021
SPhosphorylation648
SPhosphorylation550

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                                                            
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
154ADRB2187NP_000015.1in vitro;in vivo988   053   711   309   381   
156ADRBK1182NP_001610.2in vitro;in vivo11309381   
5576PRKAR2A1484NP_004148.1in vitro11316952   
5578PRKCA1498NP_002728.1in vitro11316952   


Pathway Information


No matching records could be found.

Structure Information


No matching records could be found.

Domain Information




ID Location Description
pfam03832604-634  WSK
cl04282604-634  WSK superfamily
pfam03832798-826  WSK
cl04282798-826  WSK superfamily
PRK10811883-1085  rne
PRK10811913-1083  rne
PTZ00121311-965  PTZ00121
PTZ00121110-737  PTZ00121
PRK10811846-1007  rne
PRK10811316-464  rne
PTZ00121591-1131  PTZ00121
PRK13108955-1085  PRK13108
TIGR03835913-1219  termin_org_DnaJ
PTZ00121623-1325  PTZ00121
pfam095281426-1781  Ehrlichia_rpt


Ontology Information


   
HPRD ID945
Molecular ClassAnchor protein
Molecular FunctionReceptor activity (GO:0004872)
Biological ProcessCell communication (GO:0007154); Signal transduction (GO:0007165)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO