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General Information
| Gene_Symbol | Gene_ID | Gene_Name | Chromosome | Alias |
|---|---|---|---|---|
| BCL6 | 604 | B-cell CLL/lymphoma 6  | 3 | ZBTB27, LAZ3, BCL5, BCL6A  |
- Evidence
- Gene
- mRNA
- CDS
- Protein
- PTM
- Enzyme
- PPi
- Pathway
- Structural
- Domain
- Ontology
- SNP
- Drug
- External Links
Evidence Information
| Pubmed ID | Year | Sample Information | Techniques | Mechanism | Fold Change | Remark |
|---|---|---|---|---|---|---|
| 25973304    | 2015 | Cell line : - Source : - Sample Type : CRC tumor and normal tissue No. of Sample : 22 normal colorectal mucosa, 22 microadenoma,22 colorectal cancer Stage : - | real time RT-PCR, methylation specific PCR, Flow cytometry and western blotting | Methylation | - | Methylation of BCL6B is a prognostic and chemo-sensitive marker in colorectal cancer. BCL6B suppresses colorectal cancer growth by activating P53 signaling. |
| 24220798    | 2014 | Cell line : RKO, HT 29, DLD1, LOVO, HCT116, SW480, SW620 Source : AJCC and Paiteint sample from Chinese PLA General Hospital. Sample Type : CRC tumor No. of Sample : 102 Stage : TNM Stage I-IV | Immunohistochemistry, immunofluorescence coupled with confocal microscopy and western blotting. | Up-regulation | - | The increasing expression of BCL6 in human colorectal cancer development suggests the involvement of BCL6 in tumor progression, from the earliest stages of carcinogenesis with significant increase in cancer. |
Gene Details

| Gene Type | protein coding |
|---|---|
| Gene Family | -, "Zinc fingers, C2H2-type", "BTB/POZ domain containing" |
| Description | The protein encoded by this gene is a zinc finger transcription factor and contains an N-terminal POZ domain. This protein acts as a sequence-specific repressor of transcription, and has been shown to modulate the transcription of STAT-dependent IL-4 responses of B cells. This protein can interact with a variety of POZ-containing proteins that function as transcription corepressors. This gene is found to be frequently translocated and hypermutated in diffuse large-cell lymphoma (DLCL), and may be involved in the pathogenesis of DLCL. Alternatively spliced transcript variants encoding different protein isoforms have been found for this gene. [provided by RefSeq, Aug 2015]   | Chromosome | 3 |
| Location | 3q27 |
| Start | 187439165   |
| End | 187463513   |
| Strand | -   |
| Gene Sequence |    Download   Select all |
| Length | 24349   |
| OMIM ID | 109565    |
| HGNC ID | HGNC:1001    |
| Unigene ID | Hs.478588    |
| Ensembl ID | ENSG00000113916    |
| PharmGKB ID | PA25312    |
mRNA Information
| mRNA ID | NM_001706.4 |
|---|---|
| Exon | join(1..316,10819..10857,12023..12193,13796..14017, 15705..16676,17182..17366,18828..18995,20097..20227, 20648..20785,23125..24349)   | mRNA Sequence |    Download   Select all |
| Length | 3575   |
CDS Information
| Location | 366..2486 |
|---|---|
| CDS Sequence |    Download   Select all |
| CCDS ID | CCDS3289.1 |    
Protein Information
| Protein ID | NP_001697.2 |
|---|---|
| Protein Name | B-cell CLL/lymphoma 6 |
| Molecular Wt. (Da) | 78716 |
| Protein Sequence |    Download   Select all |
| Length | 706   |
| Uniprot ID | P08254 |    
| Ensembl Protein ID | ENSP00000299855   |    
Post-translational Modification Information (Source : HPRD)
| Residue | Type | site |
|---|---|---|
| S | Phosphorylation | 308 |
| S | Phosphorylation | 308 |
Enzyme Information
No matching records could be found.
PPi Information
(Click to view network : Source STRING)      View   
| Interactant Gene ID (Source: HPRD) | Gene Symbol | HPRD ID | Ref Seq ID | Technique | References |
|---|---|---|---|---|---|
| 2033 |    EP300 |    4078 |    NP_001420.2 |    in vitro;in vivo |    12402037    |
| 5467 |    PPARD |    2679 |    NP_006229.1 |    in vitro;in vivo |    12970571    |
| 5594 |    MAPK1 |    1496 |    NP_002736.3 |    in vitro |    9649500    |
| 23683 |    PRKD3 |    6151 |    NP_005804.1 |    in vivo |    16147992    |
| 65266 |    WNK4 |    3505 |    NP_115763.2 |    in vivo |    16147992    |
Pathway Information
| Pathway Name | Pathway ID |
|---|---|
| FoxO signaling pathway |    hsa04068 |    
| Transcriptional misregulation in cancer |    hsa05202 |    
Structure Information
No matching records could be found.
Domain Information
| ID | Location | Description |
|---|---|---|
| pfam00651 | 22-128  | BTB |
| cl02518 | 22-128  | BTB superfamily |
| smart00225 | 33-126  | BTB |
| pfam13465 | 588-613  | zf-H2C2_2 |
| cl22375 | 588-613  | zf-H2C2_2 superfamily |
| pfam13465 | 616-641  | zf-H2C2_2 |
| cl22375 | 616-641  | zf-H2C2_2 superfamily |
| pfam13465 | 645-669  | zf-H2C2_2 |
| cl22375 | 645-669  | zf-H2C2_2 superfamily |
| pfam13465 | 560-585  | zf-H2C2_2 |
| cl22375 | 560-585  | zf-H2C2_2 superfamily |
| PHA03098 | 34-125  | PHA03098 |
| PHA02713 | 13-126  | PHA02713 |
| COG5189 | 543-648  | SFP1 |
| COG5048 | 572-636  | COG5048 |
| PHA03247 | 172-426  | PHA03247 |
Ontology Information
| HPRD ID | 1525 |    
|---|---|
| Molecular Class | Transcription factor |
| Molecular Function | Metallopeptidase activity (GO:0008237) |
| Biological Process | Protein metabolism (GO:0019538)   |
Drug Information
No matching records could be found.
External Links
| ArrayExpress | GO |    
|---|---|
| ICGC | GO |    
| Cancer3D | GO |    
| COSMIC | GO |    
| NCG | GO |    
| TSGene | GO |    
| Tumor Gene Family of Databases | GO |    
| CCDB | GO |    
| G2SBC | GO |    
| Osteosarcoma Database | GO |    
| RCDB | GO |    
