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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
CALD1 800 caldesmon 1  7CDM, H-CAD, L-CAD 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
18353764   2008Cell line : -

Source : -

Sample Type : Colon, prostate, and urinary bladder cancer tumor

No. of Sample : 185 colon, prostate, and urinary bladder

Stage : -

RT-PCR and sequencingAlternative splicing-Identified and validated alternative splicing between normal tissue samples from colon, bladder, and prostate in addition to cancer-specific splicing events in colon, bladder, and prostate cancer that may have diagnostic and prognostic implications.

26370611   2015Cell line : -

Source : -

Sample Type : -

No. of Sample : -

Stage : -

-Up-regulation-Among these 7 genes, high expression of 3 genes (CALD1, TAGLN, and SPTBN1) showed a poor prognosis in our validation cases.


Gene Details



NC_000007.13 (134464164..134655480)

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Gene Type protein coding
Gene Family -
Description This gene encodes a calmodulin- and actin-binding protein that plays an essential role in the regulation of smooth muscle and nonmuscle contraction. The conserved domain of this protein possesses the binding activities to Ca(2+)-calmodulin, actin, tropomyosin, myosin, and phospholipids. This protein is a potent inhibitor of the actin-tropomyosin activated myosin MgATPase, and serves as a mediating factor for Ca(2+)-dependent inhibition of smooth muscle contraction. Alternative splicing of this gene results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, Jul 2008]  
Chromosome 7
Location 7q33
Start 134464164  
End 134655480  
Strand +  
Gene Sequence

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Length 191317  
OMIM ID 114213   
HGNC ID HGNC:1441   
Unigene ID Hs.490203   
Ensembl ID ENSG00000122786   
PharmGKB ID PA26034   

mRNA Information


mRNA ID NM_033138.3
Exon join(1..337,64472..64559,88281..88392,149342..149488, 153576..154665,156276..156353,161680..161825, 168096..168357,170962..171102,178657..178700, 178797..178878,180562..180699,181121..181216, 185894..185974,188928..191317)  
mRNA Sequence

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Length 5241  



CDS Information


   
Location467..2848
CDS Sequence

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CCDS ID CCDS47716.1



Protein Information


      
Protein IDNP_149129.2
Protein Namecaldesmon 1
Molecular Wt. (Da)93100
Protein Sequence

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Length 793  
Uniprot IDQ99102
Ensembl Protein ID ENSP00000304207  



Post-translational Modification Information (Source : HPRD)


Residue Type site
TPhosphorylation638
SPhosphorylation724
TPhosphorylation730
SPhosphorylation744
SPhosphorylation759
TPhosphorylation409
SPhosphorylation494
TPhosphorylation500
SPhosphorylation514
SPhosphorylation529
TPhosphorylation403
SPhosphorylation489
TPhosphorylation495
SPhosphorylation509
SPhosphorylation524
TPhosphorylation383
SPhosphorylation469
TPhosphorylation475
SPhosphorylation489
SPhosphorylation504
TPhosphorylation377
SPhosphorylation463
TPhosphorylation469
SPhosphorylation483
SPhosphorylation498
SPhosphorylation643
SPhosphorylation656
SPhosphorylation783
SPhosphorylation789
SPhosphorylation759
SPhosphorylation414
SPhosphorylation427
SPhosphorylation553
SPhosphorylation559
SPhosphorylation529
SPhosphorylation408
SPhosphorylation421
SPhosphorylation548
SPhosphorylation554
SPhosphorylation524
SPhosphorylation388
SPhosphorylation401
SPhosphorylation528
SPhosphorylation534
SPhosphorylation504
SPhosphorylation382
SPhosphorylation395
SPhosphorylation522
SPhosphorylation528
SPhosphorylation498
YPhosphorylation27;-
YPhosphorylation27;-
YPhosphorylation27;-
SPhosphorylation202;-
SPhosphorylation196;-
SPhosphorylation202;-
SPhosphorylation196;-
SPhosphorylation12
SPhosphorylation12
SPhosphorylation723
TPhosphorylation726
SPhosphorylation493
TPhosphorylation496
SPhosphorylation488
TPhosphorylation491
SPhosphorylation468
TPhosphorylation471
SPhosphorylation462
TPhosphorylation465
TPhosphorylation735
TPhosphorylation505
TPhosphorylation500
TPhosphorylation480
TPhosphorylation474
TPhosphorylation753
TPhosphorylation523
TPhosphorylation518
TPhosphorylation498
TPhosphorylation492
SPhosphorylation765
SPhosphorylation535
SPhosphorylation530
SPhosphorylation510
SPhosphorylation504
SPhosphorylation518
SPhosphorylation289
SPhosphorylation283
SPhosphorylation263
SPhosphorylation257
TPhosphorylation546
TPhosphorylation317
TPhosphorylation311
TPhosphorylation291
TPhosphorylation285
SPhosphorylation511
SPhosphorylation282
SPhosphorylation276
SPhosphorylation256
SPhosphorylation250
SPhosphorylation684
SPhosphorylation454
SPhosphorylation449
SPhosphorylation429
SPhosphorylation423
SPhosphorylation202
SPhosphorylation493
SPhosphorylation264
SPhosphorylation258
SPhosphorylation238
SPhosphorylation232
SPhosphorylation7
SPhosphorylation7
SPhosphorylation17
YPhosphorylation21
SPhosphorylation17
YPhosphorylation21
TPhosphorylation788
TPhosphorylation558
TPhosphorylation553
TPhosphorylation533
TPhosphorylation527

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                                                            
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
801CALM1241NP_008819.1in vitro900   318   911   736   632   
805CALM2242NP_001734.1in vivo11736632   
808CALM3243NP_005175.2in vivo11736632   
2885GRB2150NP_002077.1in vitro10559276   


Pathway Information


      
Pathway Name Pathway ID
Vascular smooth muscle contraction hsa04270


Structure Information


No matching records could be found.

Domain Information




ID Location Description
pfam02029393-781  Caldesmon
pfam0202931-291  Caldesmon
PTZ00121213-689  PTZ00121
PTZ00121248-651  PTZ00121
PTZ00121214-664  PTZ00121
PTZ00121256-619  PTZ00121


Ontology Information


   
HPRD ID11830
Molecular ClassCytoskeletal associated protein
Molecular FunctionMolecular function unknown (GO:0005554)
Biological ProcessBiological_process unknown (GO:0000004); Cell recognition (GO:0008037); Organogenesis (GO:0009887)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO