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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
CCR5 1234 Chemokine (C-C motif) receptor 5  3CKR5; CCR-5; CD195; CKR-5; CCCKR5; CMKBR5; IDDM22; CC-CKR-5 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
20812987   2010Cell line : -

Source : Nanfang Hospital tumour tissue bank.

Sample Type : CRC tumor and Normal tissue

No. of Sample : 150

Stage : -

2D-Gel electrophoresis, and mass spectrometry,Western blotting, ImmunohistochemistryUp-regulation-This gene differentially expressed in between normal colorectal tissue and colorectal cancer tissue experiment done by 2-D Gel eclectrophotesis


Gene Details



Chromosome: 3; NC_000003.11 (46411633..46417697)

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Gene Type protein coding
Gene Family GPCR / Class A : Chemokine receptors : C-C motif, CD molecules
Description This gene encodes a member of the beta chemokine receptor family, which is predicted to be a seven transmembrane protein similar to G protein-coupled receptors. This protein is expressed by T cells and macrophages, and is known to be an important co-receptor for macrophage-tropic virus, including HIV, to enter host cells. Defective alleles of this gene have been associated with the HIV infection resistance. The ligands of this receptor include monocyte chemoattractant protein 2 (MCP-2), macrophage inflammatory protein 1 alpha (MIP-1 alpha), macrophage inflammatory protein 1 beta (MIP-1 beta) and regulated on activation normal T expressed and secreted protein (RANTES). Expression of this gene was also detected in a promyeloblastic cell line, suggesting that this protein may play a role in granulocyte lineage proliferation and differentiation. This gene is located at the chemokine receptor gene cluster region. Two transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jul 2008]  
Chromosome 3
Location 3p21.31
Start 46370142  
End 46376206  
Strand +  
Gene Sequence

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Length 6065  
OMIM ID 601373   
HGNC ID HGNC:1606   
Unigene ID Hs.450802   
Ensembl ID ENSG00000160791   
PharmGKB ID -   

mRNA Information


mRNA ID NM_000579.3
Exon join(1..57,559..847,2751..6065)  
mRNA Sequence

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Length 3686  



CDS Information


   
Location 2762..3820
CDS Sequence

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CCDS ID CCDS2739.1



Protein Information


      
Protein IDNP_000570.1
Protein NameChemokine (C-C motif) receptor 5
Molecular Wt. (Da)40393
Protein Sequence

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Length 352  
Uniprot IDP48023
Ensembl Protein ID ENSP00000344739  



Post-translational Modification Information (Source : HPRD)


Residue Type site
YSulfation10
YSulfation14
YSulfation15
CPalmitoylation321
CPalmitoylation323
CPalmitoylation324
YSulfation3
SGlycosylation6
SPhosphorylation336
SPhosphorylation337
SPhosphorylation342
SPhosphorylation349

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                                                                                                                                                                                                                                                                                                                                                                                                                                    
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
156ADRBK1182NP_001610.2in vivo10085131   
174AFP74NP_001125.1in vitro;in vivo12176010   
408ARRB1146NP_004032.2in vitro12065593   
920CD41740NP_000607.1in vivo10816381   
1231CCR23166NP_000638.1in vivo11350939   
2185PTK2B3131NP_004094.3in vivo9446638   
2770GNAI1756NP_002060.4in vivo15251452   
2771GNAI2764NP_002061.1in vivo15251452   
2773GNAI3765NP_006487.1in vivo15251452   
2775GNAO1757NP_066268.1in vivo15251452   
2776GNAQ2998NP_002063.2in vivo15251452   
3716JAK1992NP_002218.2in vivo10037796   
3717JAK2993NP_004963.1in vivo11591716   
3932LCK1080NP_005347.3in vivo11591716   
5004ORM1724NP_000598.2in vitro11336643   
5686PSMA51464NP_002781.2in vivo;yeast 2-hybrid11877445   
5747PTK22859NP_005598.3in vitro;in vivo10384144   
6347CCL21149NP_002973.1in vivo10477718   
6348CCL31656NP_002974.1in vitro;in vivo1   170   007   310   477   710   
6351CCL41657NP_002975.1in vitro;in vivo124   270   158   663   314   
6352CCL51751NP_002976.2in vitro;in vivo92   890   168   663   314   100   000   000   000   000   000   000   000   
6354CCL71150CAA50405.1in vitro10477718   
6356CCL113098NP_002977.1in vitro;in vivo1   126   415   210   477   710   
6772STAT12777NP_009330.1in vivo14674010   
6774STAT326NP_644805.1in vivo14674010   
7294TXK2505NP_003319.2in vivo11859127   
7852CXCR41217NP_001008540.1in vitro12429730   
11230PRAF26596NP_009144.1in vivo;yeast 2-hybrid15757671   


Pathway Information


                              
Pathway Name Pathway ID
Chemokine signaling pathway hsa04062
Cytokine-cytokine receptor interaction hsa04060
Endocytosis hsa04144
Toxoplasmosis hsa05145
Viral carcinogenesis hsa05203


Structure Information


No matching records could be found.

Domain Information




ID Location Description
pfam0000159-297  7tm_1
PHA0308736-304  PHA03087
PHA026386-320  PHA02638
PHA0283413-314  PHA02834
PHA0323550-319  PHA03235
PHA0323462-321  PHA03234


Ontology Information


   
HPRD ID610
Molecular ClassCell surface receptor
Molecular FunctionReceptor binding (GO:0005102)
Biological ProcessCell communication (GO:0007154); Signal transduction (GO:0007165)  



SNP Information


View SNP Geneview Report   

Drug Information


Uniprot ID DrugBank ID Name Type
P51681DB04835MaravirocSmallMoleculeDrug

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO