Search results:


General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
CLCN4 1183 chloride voltage-gated channel 4  XCLC4; ClC-4; ClC-4A 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
20087350   2014Cell line : RKO,HCT 116

Source : -

Sample Type : -

No. of Sample : -

Stage : -

Migration Assays,real time RT-PCR,PCRUnknown-CLCN4 is a novel driver of colon cancer progression.


Gene Details



NC_000023.10 (10124985..10205700)

View Larger Image
   
Gene Type protein coding
Gene Family Chloride voltage-gated channels
Description The CLCN family of voltage-dependent chloride channel genes comprises nine members (CLCN1-7, Ka and Kb) which demonstrate quite diverse functional characteristics while sharing significant sequence homology. Chloride channel 4 has an evolutionary conserved CpG island and is conserved in both mouse and hamster. This gene is mapped in close proximity to APXL (Apical protein Xenopus laevis-like) and OA1 (Ocular albinism type I), which are both located on the human X chromosome at band p22.3. The physiological role of chloride channel 4 remains unknown but may contribute to the pathogenesis of neuronal disorders. Alternate splicing results in two transcript variants that encode different proteins. [provided by RefSeq, Mar 2012]  
Chromosome X
Location Xp22.3
Start 10124985  
End 10205700  
Strand +  
Gene Sequence

   Download   Select all

Length 80716  
OMIM ID 302910   
HGNC ID HGNC:2022   
Unigene ID -   
Ensembl ID ENSG00000073464   
PharmGKB ID -   

mRNA Information


mRNA ID ?NM_001256944.1
Exon  
mRNA Sequence

   Download   Select all

Length  



CDS Information


   
Location
CDS Sequence

   Download   Select all

CCDS ID CCDS14137.1



Protein Information


      
Protein ID
Protein Namechloride voltage-gated channel 4
Molecular Wt. (Da)0
Protein Sequence

   Download   Select all

Length 0  
Uniprot IDQ99567
Ensembl Protein ID ENSP00000458954  



Post-translational Modification Information (Source : HPRD)


No matching records could be found.

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

No matching records from HPRD source could be found.

Pathway Information


No matching records could be found.

Structure Information


No matching records could be found.

Domain Information




ID Location Description
cd0368478-584  ClC_3_like
cl0291578-584  Voltage_gated_ClC superfamily
cd04591607-745  CBS_pair_EriC_assoc_euk_bac
cl15354607-745  CBS_pair superfamily
cd0103678-573  ClC_euk
cd0368571-584  ClC_6_like
pfam00654162-565  Voltage_CLC
cd03683148-584  ClC_1_like
COG0038142-582  ClcA
cd00400155-559  Voltage_gated_ClC
cd0103177-574  EriC
PRK0527776-616  PRK05277
cd01034156-572  EriC_like
cd01033202-559  ClC_like
cd02205606-745  CBS_pair
cd04636606-745  CBS_pair_23
cd04612616-744  CBS_pair_SpoIVFB_EriC_assoc
pfam00571693-747  CBS
smart00116701-744  CBS
cd04635619-744  CBS_pair_22
cd04610617-744  CBS_pair_ParBc_assoc
cd04638618-744  CBS_pair_25
cd04586617-744  CBS_pair_BON_assoc
cd04606617-746  CBS_pair_Mg_transporter
cd04613615-743  CBS_pair_SpoIVFB_EriC_assoc2
cd02205701-748  CBS_pair
cd03682218-484  ClC_sycA_like
cd04803607-744  CBS_pair_15
cd04597675-744  CBS_pair_DRTGG_assoc2
cd04585606-744  CBS_pair_ACT_assoc2
PRK01610205-575  PRK01610
cd04634608-744  CBS_pair_21
cd04590616-743  CBS_pair_CorC_HlyC_assoc
cd04600703-745  CBS_pair_HPP_assoc
cd04585700-747  CBS_pair_ACT_assoc2
cd04613594-657  CBS_pair_SpoIVFB_EriC_assoc2
cd04584656-744  CBS_pair_ACT_assoc
cd04601617-744  CBS_pair_IMPDH
cd04620700-748  CBS_pair_7
pfam00571596-660  CBS
cd04800693-745  CBS_pair_CAP-ED_DUF294_PBI_assoc2
cd04637703-744  CBS_pair_24
smart00116611-659  CBS
cd04622700-745  CBS_pair_9
cd04629612-744  CBS_pair_16
COG0517598-743  CBS
PRK01862205-573  PRK01862
COG0517694-747  CBS
PTZ00314700-742  PTZ00314
PRK14869675-744  PRK14869
COG3448592-753  COG3448


Ontology Information


   
HPRD ID3493
Molecular ClassNot Available
Molecular FunctionLigand-dependent nuclear receptor activity (GO:0004879)
Biological ProcessCell communication (GO:0007154); Signal transduction (GO:0007165)  



SNP Information


View SNP Geneview Report   

Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO