Search results:
General Information
- Evidence
- Gene
- mRNA
- CDS
- Protein
- PTM
- Enzyme
- PPi
- Pathway
- Structural
- Domain
- Ontology
- SNP
- Drug
- External Links
Evidence Information
| Pubmed ID | Year | Sample Information | Techniques | Mechanism | Fold Change | Remark |
|---|---|---|---|---|---|---|
| 17848589    | 2007 | Cell line : - Source : Tumor Bank Network established at the Centro Nacional de Investigaciones Oncologicas (CNIO). Sample Type : - No. of Sample : - Stage : - | Antibody Microarrays,Protein Labeling and Microarray Assay,Tissue Microarray Design and Immunohistochemistry | Up-regulation | 1.65 | - |
Gene Details

| Gene Type | protein coding |
|---|---|
| Gene Family | - |
| Description | Clathrin is a large, soluble protein composed of heavy and light chains. It functions as the main structural component of the lattice-type cytoplasmic face of coated pits and vesicles which entrap specific macromolecules during receptor-mediated endocytosis. This gene encodes one of two clathrin light chain proteins which are believed to function as regulatory elements. Alternative splicing results in multiple transcript variants. Related pseudogenes have been identified on chromosomes 8 and 12. [provided by RefSeq, May 2010]   | Chromosome | 9 |
| Location | 9p13 |
| Start | 36190856   |
| End | 36212062   |
| Strand | +   |
| Gene Sequence |    Download   Select all |
| Length | 21207   |
| OMIM ID | 118960    |
| HGNC ID | HGNC:2090    |
| Unigene ID | Hs.522114     |
| Ensembl ID | ENSG00000122705    |
| PharmGKB ID | -    |
mRNA Information
| mRNA ID | NM_007096.3 |
|---|---|
| Exon | join(1..418,6696..6733,8124..8241,13213..13324, 18412..18465,19770..19805,20748..21207)   | mRNA Sequence |    Download   Select all |
| Length | 1246   |
CDS Information
| Location | join(202..418,6696..6733,8124..8241,13213..13324, 18412..18465,19770..19805,20748..20919) |
|---|---|
| CDS Sequence |    Download   Select all |
| CCDS ID | CCDS6601.1 |    
Protein Information
| Protein ID | NP_001070145.1 |
|---|---|
| Protein Name | Clathrin, light chain (Lca) |
| Molecular Wt. (Da) | 25545 |
| Protein Sequence |    Download   Select all |
| Length | 236   |
| Uniprot ID | P25445 |    
| Ensembl Protein ID | ENSP00000347426   |    
Post-translational Modification Information (Source : HPRD)
| Residue | Type | site |
|---|---|---|
| S | Phosphorylation | 206 |
| S | Phosphorylation | 176 |
| S | Phosphorylation | 194 |
| S | Phosphorylation | 236 |
| S | Phosphorylation | 206 |
| S | Phosphorylation | 224 |
| S | Phosphorylation | 105 |
| S | Phosphorylation | 105 |
| S | Phosphorylation | 105 |
| S | Phosphorylation | 109 |
| S | Phosphorylation | 109 |
| S | Phosphorylation | 109 |
Enzyme Information
No matching records could be found.
PPi Information
(Click to view network : Source STRING)      View   
| Interactant Gene ID (Source: HPRD) | Gene Symbol | HPRD ID | Ref Seq ID | Technique | References |
|---|---|---|---|---|---|
| 1213 |    CLTC |    350 |    NP_004850.1 |    in vitro;yeast 2-hybrid |    124   263   792   406   259    |
Pathway Information
| Pathway Name | Pathway ID |
|---|---|
| Bacterial invasion of epithelial cells |    hsa05100 |    
| Endocrine and other factor-regulated calcium reabsorption |    hsa04961 |    
| Endocytosis |    hsa04144 |    
| Huntington's disease |    hsa05016 |    
| Lysosome |    hsa04142 |    
| Synaptic vesicle cycle |    hsa04721 |    
Structure Information
No matching records could be found.
Domain Information
| ID | Location | Description |
|---|---|---|
| pfam01086 | 20-247  | Clathrin_lg_ch |
| cl03091 | 20-247  | Clathrin_lg_ch superfamily |
| pfam06152 | 85-184  | Phage_min_cap2 |
| cl10072 | 85-184  | Phage_Mu_F superfamily |
| COG3883 | 98-184  | CwlO1 |
Ontology Information
| HPRD ID | 609 |    
|---|---|
| Molecular Class | Structural protein |
| Molecular Function | Receptor activity (GO:0004872) |
| Biological Process | Cell communication (GO:0007154); Signal transduction (GO:0007165)   |
Drug Information
No matching records could be found.
External Links
| ArrayExpress | GO |    
|---|---|
| ICGC | GO |    
| Cancer3D | GO |    
| COSMIC | GO |    
| NCG | GO |    
| TSGene | GO |    
| Tumor Gene Family of Databases | GO |    
| CCDB | GO |    
| G2SBC | GO |    
| Osteosarcoma Database | GO |    
| RCDB | GO |    
