Search results:
General Information
| Gene_Symbol | Gene_ID | Gene_Name | Chromosome | Alias |
|---|---|---|---|---|
| EFHD1 | 80303 | EF-hand domain family, member D1 | 2 | FLJ13612 |
- Evidence
- Gene
- mRNA
- CDS
- Protein
- PTM
- Enzyme
- PPi
- Pathway
- Structural
- Domain
- Ontology
- SNP
- Drug
- External Links
Evidence Information
| Pubmed ID | Year | Sample Information | Techniques | Mechanism | Fold Change | Remark |
|---|---|---|---|---|---|---|
| 24861485 | 2014 | Cell line : - Source : Department of Digestive Surgery, Graduate School of Medicine, Nihon University. Sample Type : CRC tumor and normal tissue No. of Sample : 144 Stage : AJCC Stage I,II,III,IV | Bisulfite treatment of genomic DNA,Methylation-specific PCR,Pyrosequencing analysis | Methylation | - | EFHD1 methylation was highly positive in CRC plasma samples, and they might be useful in detection of CRC, especially for early-stage CRCs. |
Gene Details
| Gene Type | protein coding |
|---|---|
| Gene Family | EF-hand domain containing |
| Description | EFHD1 is an EF-hand domain-containing protein that displays increased expression during neuronal differentiation (Tominaga and Tomooka, 2002 [PubMed 12270117]).[supplied by OMIM, Mar 2008] | Chromosome | 2 |
| Location | 2q37.1 |
| Start | 233470767 |
| End | 233547491 |
| Strand | + |
| Gene Sequence | Download Select all |
| Length | 76725 |
| OMIM ID | 611617 |
| HGNC ID | HGNC:29556 |
| Unigene ID | Hs.516769 |
| Ensembl ID | ENSG00000115468 |
| PharmGKB ID | PA134935372 |
Protein Information
| Protein ID | NP_001230181.1 |
|---|---|
| Protein Name | EF-hand domain family, member D1 |
| Molecular Wt. (Da) | 0 |
| Protein Sequence | Download Select all |
| Length | 239 |
| Uniprot ID | Q9C0C2 |
| Ensembl Protein ID | ENSP00000350990 |
Post-translational Modification Information (Source : HPRD)
| Residue | Type | site |
|---|---|---|
| S | Phosphorylation | 22 |
| S | Phosphorylation | 60 |
Enzyme Information
No matching records could be found.
PPi Information
(Click to view network : Source STRING) View
No matching records from HPRD source could be found.
Pathway Information
No matching records could be found.
Structure Information
No matching records could be found.
Domain Information
| ID | Location | Description |
|---|---|---|
| cd00051 | 94-152 | EFh |
| cl08302 | 94-152 | EFh superfamily |
| pfam13405 | 94-123 | EF-hand_6 |
| cl23634 | 94-123 | EF-hand_6 superfamily |
| cd00052 | 96-156 | EH |
| cd05023 | 85-152 | S-100A11 |
| pfam00036 | 94-122 | EF-hand_1 |
| cl23489 | 94-122 | EF-hand_1 superfamily |
| pfam13833 | 107-152 | EF-hand_8 |
| smart00054 | 94-122 | EFh |
| cl23347 | 94-122 | EFh superfamily |
| cd00213 | 114-159 | S-100 |
| pfam13499 | 100-155 | EF-hand_7 |
| COG5126 | 79-151 | FRQ1 |
| PTZ00183 | 79-154 | PTZ00183 |
| PTZ00184 | 92-152 | PTZ00184 |
| PTZ00184 | 83-151 | PTZ00184 |
| PTZ00183 | 98-157 | PTZ00183 |
| COG5126 | 83-152 | FRQ1 |
| smart00027 | 96-156 | EH |
Ontology Information
| HPRD ID | 10114 |
|---|---|
| Molecular Class | Calcium binding protein |
| Molecular Function | Molecular function unknown (GO:0005554) |
| Biological Process | Regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism (GO:0019219) |
Drug Information
No matching records could be found.