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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
FSCN1 6624 fascin actin-bundling protein 1  7p55, FLJ38511 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
25302416   2014Cell line : -

Source : -

Sample Type : -

No. of Sample : -

Stage : -

-Up-regulation-Fascin1 as a potent prognostic biomarker for breast, colorectal, esophageal cancers and head and neck squamous cell carcinomas.


Gene Details



Chromosome 7 - NC_000007.14 (5592805..5606656)

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Gene Type protein coding
Gene Family Fascins
Description This gene encodes a member of the fascin family of actin-binding proteins. Fascin proteins organize F-actin into parallel bundles, and are required for the formation of actin-based cellular protrusions. The encoded protein plays a critical role in cell migration, motility, adhesion and cellular interactions. Expression of this gene is known to be regulated by several microRNAs, and overexpression of this gene may play a role in the metastasis of multiple types of cancer by increasing cell motility. Expression of this gene is also a marker for Reed-Sternberg cells in Hodgkin's lymphoma. A pseudogene of this gene is located on the long arm of chromosome 15.  
Chromosome 7
Location 7p22
Start 5592805  
End 5606656  
Strand +  
Gene Sequence

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Length 13852  
OMIM ID 602689   
HGNC ID HGNC:11148   
Unigene ID Hs.118400   
Ensembl ID ENSG00000075618   
PharmGKB ID -   

mRNA Information


mRNA ID NM_003088.3
Exon join(1..964,10453..10609,10692..10813,11059..11226, 12468..13852)  
mRNA Sequence

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Length 2812  



CDS Information


   
Location join(133..964,10453..10609,10692..10813,11059..11226, 12468..12670)
CDS Sequence

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CCDS ID CCDS5342.1



Protein Information


      
Protein IDNP_003079.1
Protein Namefascin actin-bundling protein 1
Molecular Wt. (Da)54399
Protein Sequence

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Length 493  
Uniprot IDO75874
Ensembl Protein ID ENSP00000260985  



Post-translational Modification Information (Source : HPRD)


Residue Type site
SPhosphorylation39
SPhosphorylation38
KAcetylation471

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                                                                           
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
58ACTA130NP_001091.1in vitro8999969   
70ACTC115NP_005150.1in vivo12139639   
1499CTNNB1286NP_001895.1in vitro10026156   
4804NGFR1197NP_002498.1in vitro;in vivo;yeast 2-hybrid12789270   
5578PRKCA1498NP_002728.1in vitro;in vivo14532112   


Pathway Information


      
Pathway Name Pathway ID
MicroRNAs in cancer hsa05206


Structure Information


PDB ID1DFC
Resolution2.9
MethodX-RAY DIFFRACTION
Chains A,B  
Molecule FASCIN  
Model View



Domain Information




ID Location Description
cd0025713-134  Fascin
cl2245813-134  RICIN superfamily
cd00257260-378  Fascin
cl22458260-378  RICIN superfamily
cd00257383-493  Fascin
cl22458383-493  RICIN superfamily
cd00257139-256  Fascin
cl22458139-256  RICIN superfamily
pfam06268268-378  Fascin
pfam0626821-134  Fascin
pfam06268391-493  Fascin
pfam06268142-256  Fascin
pfam06229301-376  FRG1


Ontology Information


   
HPRD ID126
Molecular ClassStructural protein
Molecular FunctionTransmembrane receptor activity (GO:0004888)
Biological ProcessImmune response (GO:0006955)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO