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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
GALR1 2587 galanin receptor 1  18- 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
22859720   2012Cell line : HCT116, LS174T, RKO, HT29, SW620 and LoVo, LS174T

Source : ATCC, University of Southern California.

Sample Type : CRC tumor and normal tissue

No. of Sample : 8

Stage : -

Microarray analysis,Q-PCR analysis,Western blotting,Annexin V/Propidium Iodide analysisUp-regulation-The G-protein-coupled receptor galanin receptor 1 (GalR1) was identified as a novel regulator of drug resistance.


Gene Details



NC_000018.9 (74962008..74982098)

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Gene Type protein coding
Gene Family GPCR / Class A : Galanin receptors
Description The neuropeptide galanin elicits a range of biological effects by interaction with specific G-protein-coupled receptors. Galanin receptors are seven-transmembrane proteins shown to activate a variety of intracellular second-messenger pathways. GALR1 inhibits adenylyl cyclase via a G protein of the Gi/Go family. GALR1 is widely expressed in the brain and spinal cord, as well as in peripheral sites such as the small intestine and heart. [provided by RefSeq, Jul 2008]  
Chromosome 18
Location 18q23
Start 74962008  
End 74982098  
Strand +  
Gene Sequence

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Length 20091  
OMIM ID 600377   
HGNC ID HGNC:4132   
Unigene ID Hs.272191   
Ensembl ID ENSG00000166573   
PharmGKB ID PA28545   

mRNA Information


mRNA ID NM_001480.3
Exon join(1..1163,6107..6172,18534..20091)  
mRNA Sequence

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Length 2787  



CDS Information


   
Location 498..1547
CDS Sequence

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CCDS ID CCDS12012.1



Protein Information


      
Protein ID NP_001471.2
Protein Namegalanin receptor 1
Molecular Wt. (Da)38822
Protein Sequence

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Length 349  
Uniprot IDP40938
Ensembl Protein ID ENSP00000369411  



Post-translational Modification Information (Source : HPRD)


No matching records could be found.

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

               
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
51083GAL658NP_057057.2in vitro;in vivo861   719   998   086   677   000   000   


Pathway Information


      
Pathway Name Pathway ID
Neuroactive ligand-receptor interaction hsa04080


Structure Information


No matching records could be found.

Domain Information




ID Location Description
pfam0000157-303  7tm_1
PHA0308733-336  PHA03087
PHA0263838-336  PHA02638
PHA0283433-318  PHA02834


Ontology Information


   
HPRD ID22
Molecular ClassG protein coupled receptor
Molecular FunctionDNA binding (GO:0003677)
Biological ProcessRegulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism (GO:0019219)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO