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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
GAS5 60674 growth arrest-specific 5 (non-protein coding)  1SNHG2, NCRNA00030 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
25326054   2014Cell line : -

Source : -

Sample Type : CRC tumor and normal tissues

No. of Sample : 66

Stage : -

Real-time PCRDown-regulation- GAS5, as a growth regulator, may serve as a candidate prognostic biomarker in human colorectal cancer.


Gene Details



NC_000001.10 (173833039..173837125, complement)

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Gene Type protein coding
Gene Family Long non-coding RNAs, "-"
Description This gene produces a spliced long non-coding RNA and is a member of the 5' terminal oligo-pyrimidine class of genes. It is a small nucleolar RNA host gene, containing multiple C/D box snoRNA genes in its introns. Part of the secondary RNA structure of the encoded transcript mimics glucocorticoid response element (GRE) which means it can bind to the DNA binding domain of the glucocorticoid receptor (nuclear receptor subfamily 3, group C, member 1). This action blocks the glucocorticoid receptor from being activated and thereby stops it from regulating the transcription of its target genes. This transcript is also thought to regulate the transcriptional activity of other receptors, such as androgen, progesterone and mineralocorticoid receptors, that can bind to its GRE mimic region. Multiple functions have been associated with this transcript, including cellular growth arrest and apoptosis. It has also been identified as a potential tumor suppressor, with its down-regulation associated with cancer in multiple different tissues. [provided by RefSeq, Mar 2015]  
Chromosome 1
Location 1q25.1
Start 173833039  
End 173837125  
Strand -  
Gene Sequence

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Length 4087  
OMIM ID 608280   
HGNC ID HGNC:16355   
Unigene ID -   
Ensembl ID ENSG00000234741   
PharmGKB ID -   

mRNA Information


mRNA ID
Exon  
mRNA Sequence

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Length  



CDS Information


   
Location
CDS Sequence

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CCDS ID -



Protein Information


      
Protein ID
Protein Namegrowth arrest-specific 5 (non-protein coding)
Molecular Wt. (Da)0
Protein Sequence

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Length 0  
Uniprot ID
Ensembl Protein ID  



Post-translational Modification Information (Source : HPRD)


No matching records could be found.

Enzyme Information


No matching records could be found.

PPi Information


No STRING Network could be found.

No matching records from HPRD source could be found.

Pathway Information


No matching records could be found.

Structure Information


No matching records could be found.

Domain Information


No matching records could be found.

Ontology Information


   
HPRD ID-
Molecular ClassNot Available
Molecular Function-
Biological Process-  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO