Search results:


General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
GTF2I 2969 General transcription factor II, i  7WBS; DIWS; SPIN; IB291; BAP135; BTKAP1; TFII-I; WBSCR6; GTFII-I 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
22968445   2012Cell line : -

Source : Department of Pathology of Wrocaw Medical University.

Sample Type : -

No. of Sample : -

Stage : -

Laser capture microdissection,FFPE-FASP,SAX fractionation, LC-MSMS,Label-freequantitation.Up-regulation4.4-


Gene Details



Chromosome: 7; NC_000007.13 (74072030..74175022)

View Larger Image
   
Gene Type protein coding
Gene Family General transcription factors
Description This gene encodes a multifunctional phosphoprotein with roles in transcription and signal transduction. It is deleted in Williams-Beuren syndrome, a multisystem developmental disorder caused by the deletion of contiguous genes at chromosome 7q11.23. Alternative splicing results in multiple transcript variants. Related pseudogenes have been identified on chromosomes 7, 13 and 21. [provided by RefSeq, Jul 2009]  
Chromosome 7
Location 7q11.23
Start 74657665  
End 74760692  
Strand +  
Gene Sequence

   Download   Select all

Length 103028  
OMIM ID 601679   
HGNC ID HGNC:4659   
Unigene ID Hs.647041    
Ensembl ID ENSG00000077809   
PharmGKB ID -   

mRNA Information


mRNA ID NM_032999.3
Exon join(1..404,31460..31563,33309..33447,41297..41431, 42583..42766,42942..42970,47500..47554,48726..48769, 53368..53445,57193..57252,59230..59286,61215..61277, 71122..71232,72565..72630,74815..74998,76259..76317, 77797..77868,78836..79019,80381..80439,85785..85856, 87094..87277,88219..88277,88673..88747,90351..90452, 91361..91426,91604..91787,93697..93752,94426..94506, 95430..95513,96182..96365,97845..97873,99156..99197, 100295..100336,101116..101191,101884..103028)  
mRNA Sequence

   Download   Select all

Length 4529  



CDS Information


   
Location join(31465..31563,33309..33447,41297..41431,42583..42766, 42942..42970,47500..47554,48726..48769,53368..53445, 57193..57252,59230..59286,61215..61277,71122..71232, 72565..72630,74815..74998,76259..76317,77797..77868, 78836..79019,80381..80439,85785..85856,87094..87277, 88219..88277,88673..88747,90351..90452,91361..91426, 91604..91787,93697..93752,94426..94506,95430..9551
CDS Sequence

   Download   Select all

CCDS ID CCDS5573.1



Protein Information


      
Protein IDNP_001157108.1
Protein NameGeneral transcription factor II, i
Molecular Wt. (Da)109904
Protein Sequence

   Download   Select all

Length 976  
Uniprot IDO43683
Ensembl Protein ID ENSP00000302530  



Post-translational Modification Information (Source : HPRD)


Residue Type site
SPhosphorylation517
SPhosphorylation497
SPhosphorylation496
SPhosphorylation476
YPhosphorylation248
YPhosphorylation652
YPhosphorylation248
YPhosphorylation632
YPhosphorylation248
YPhosphorylation631
YPhosphorylation248
YPhosphorylation611
YPhosphorylation248
YPhosphorylation398
YPhosphorylation503
YPhosphorylation248
YPhosphorylation378
YPhosphorylation483
YPhosphorylation248
YPhosphorylation377
YPhosphorylation482
YPhosphorylation248
YPhosphorylation357
YPhosphorylation462
SPhosphorylation648
SPhosphorylation654
SPhosphorylation647
SPhosphorylation653
SPhosphorylation627
SPhosphorylation633
SPhosphorylation412
SPhosphorylation784
SPhosphorylation392
SPhosphorylation764
SPhosphorylation391
SPhosphorylation763
SPhosphorylation371
SPhosphorylation743
YPhosphorylation248
YPhosphorylation248
YPhosphorylation248
YPhosphorylation248
SPhosphorylation668
SPhosphorylation674
SPhosphorylation823;-
SPhosphorylation803;-
SPhosphorylation802;-
SPhosphorylation782;-
SPhosphorylation679;-
SPhosphorylation659;-
SPhosphorylation658;-
SPhosphorylation638;-
TPhosphorylation687;-
TPhosphorylation667;-
TPhosphorylation666;-
TPhosphorylation646;-
SPhosphorylation103
SPhosphorylation103
SPhosphorylation103
SPhosphorylation103
SPhosphorylation207
SPhosphorylation210
SPhosphorylation207
SPhosphorylation210
SPhosphorylation207
SPhosphorylation210
SPhosphorylation207
SPhosphorylation210
SPhosphorylation515
SPhosphorylation495
SPhosphorylation494
SPhosphorylation474
TPhosphorylation556
TPhosphorylation536
TPhosphorylation535
TPhosphorylation515
TPhosphorylation558
TPhosphorylation538
TPhosphorylation537
TPhosphorylation517
SPhosphorylation677
SPhosphorylation657
SPhosphorylation656
SPhosphorylation636
TPhosphorylation698
TPhosphorylation678
TPhosphorylation677
TPhosphorylation657
SPhosphorylation699
SPhosphorylation679
SPhosphorylation678
SPhosphorylation658
SPhosphorylation830
SPhosphorylation810
SPhosphorylation809
SPhosphorylation789
SPhosphorylation831
SPhosphorylation811
SPhosphorylation810
SPhosphorylation790
SPhosphorylation839
SPhosphorylation819
SPhosphorylation818
SPhosphorylation798
TPhosphorylation850
TPhosphorylation830
TPhosphorylation829
TPhosphorylation809
SPhosphorylation95
SPhosphorylation95
SPhosphorylation95
SPhosphorylation95
TPhosphorylation111
TPhosphorylation111
TPhosphorylation111
TPhosphorylation111
TPhosphorylation837
TPhosphorylation817
TPhosphorylation816
TPhosphorylation796
SPhosphorylation278
TPhosphorylation202
TPhosphorylation202
TPhosphorylation202
TPhosphorylation202
SPhosphorylation710
SPhosphorylation690
SPhosphorylation689
SPhosphorylation669
SPhosphorylation877
SPhosphorylation857
SPhosphorylation856
SPhosphorylation836
YPhosphorylation920
SPhosphorylation925
YPhosphorylation900
SPhosphorylation905
YPhosphorylation899
SPhosphorylation904
YPhosphorylation879
SPhosphorylation884

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                                                                                                                        
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
4087SMAD23221NP_005892.1in vivo16055724   
4609MYC1818NP_002458.2in vitro8377829   
5396PRRX11337NP_073207.1in vitro;in vivo9334314   
6722SRF2788NP_003122.1in vitro;in vivo1   208   208   695   841   710   000   000   
6772STAT12777NP_009330.1in vitro;in vivo9584171   
6774STAT326NP_644805.1in vitro;in vivo9584171   
7391USF11880NP_009053.1in vitro;in vivo93   845   871   961   251   
7528YY12482NP_003394.1in vitro;in vivo11287625   


Pathway Information


                  
Pathway Name Pathway ID
Basal transcription factors hsa03022
cGMP-PKG signaling pathway hsa04022
Herpes simplex infection hsa05168


Structure Information


PDB ID2DN4
Resolution-
Methodsolution NMR
Chains A  
Molecule General transcription factor II-I  
Model View



Domain Information




ID Location Description
pfam02946112-187  GTF2I
cl08383112-187  GTF2I superfamily
pfam02946571-646  GTF2I
cl08383571-646  GTF2I superfamily
pfam02946466-541  GTF2I
cl08383466-541  GTF2I superfamily
pfam02946361-436  GTF2I
cl08383361-436  GTF2I superfamily
pfam02946868-943  GTF2I
cl08383868-943  GTF2I superfamily
pfam02946733-797  GTF2I
cl08383733-797  GTF2I superfamily


Ontology Information


   
HPRD ID3907
Molecular ClassTranscription factor
Molecular FunctionProtein serine/threonine kinase activity (GO:0004674)
Biological ProcessCell communication (GO:0007154); Signal transduction (GO:0007165)  



SNP Information


View SNP Geneview Report   

Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO