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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
IFNA1 3439 Interferon, alpha 1  9IFL; IFN; IFNA@; IFNA13; IFN-ALPHA; IFN-alphaD 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
9792144   1998Cell line : -

Source : -

Sample Type : Blood sample

No. of Sample : 28 CRC patients and 44 healthy persons

Stage : -

Whole blood cell culture and stimulation of cytokine secretion, ELISA.Down-regulation-The differential expression of Blood protien were analysed by ELISA in colorectal cancer and normal colorectal tissue.


Gene Details



Chromosome: 9; NC_000009.11 (21440453..21441315)

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Gene Type protein coding
Gene Family Interferons
Description The protein encoded by this gene is produced by macrophages and has antiviral activity. This gene is intronless and the encoded protein is secreted. [provided by RefSeq, Sep 2011]  
Chromosome 9
Location 9p22
Start 21440454  
End 21441316  
Strand +  
Gene Sequence

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Length 863  
OMIM ID 147660   
HGNC ID HGNC:5417   
Unigene ID Hs.37026    
Ensembl ID ENSG00000197919   
PharmGKB ID -   

mRNA Information


mRNA ID NM_024013.2
Exon 1..863  
mRNA Sequence

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Length 863  



CDS Information


   
Location 55..624
CDS Sequence

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CCDS ID CCDS6508.1



Protein Information


      
Protein IDNP_076918.1
Protein NameInterferon, alpha 1
Molecular Wt. (Da)19386
Protein Sequence

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Length 189  
Uniprot IDQ03135
Ensembl Protein ID ENSP00000339191  



Post-translational Modification Information (Source : HPRD)


No matching records could be found.

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                              
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
1380CR2399NP_001006659.1in vivo1849076   
10379IRF9960NP_006075.3in vitro8454630   


Pathway Information


                                                                                          
Pathway Name Pathway ID
Autoimmune thyroid disease hsa05320
Cytokine-cytokine receptor interaction hsa04060
Cytosolic DNA-sensing pathway hsa04623
Hepatitis B hsa05161
Hepatitis C hsa05160
Herpes simplex infection hsa05168
Influenza A hsa05164
Jak-STAT signaling pathway hsa04630
Measles hsa05162
Natural killer cell mediated cytotoxicity hsa04650
PI3K-Akt signaling pathway hsa04151
Regulation of autophagy hsa04140
RIG-I-like receptor signaling pathway hsa04622
Toll-like receptor signaling pathway hsa04620
Tuberculosis hsa05152


Structure Information


No matching records could be found.

Domain Information




ID Location Description
cd0009526-178  IFab
cl0009226-178  IFab superfamily
pfam0014326-187  Interferon
smart0007658-175  IFabd


Ontology Information


   
HPRD ID2565
Molecular ClassCytokine
Molecular FunctionTranscription factor activity (GO:0003700)
Biological ProcessRegulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism (GO:0019219)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO