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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
LASP1 3927 LIM and SH3 protein 1  17MLN50; Lasp-1 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
20660701   2010Cell line : -

Source : -

Sample Type : -

No. of Sample : -

Stage : -

Immunohistochemistry, 2-D DIGE, Up-regulation-Overexpression of LASP-1 was found in metastatic CRC tissues (p=0.002), and its expression level was closely correlated with overall survival of patients with CRC.

LASP-1 might be a promising target in the treatment of patients with CRC with growth and metastasis of CRC.

SW620 CRC cells were used.

20812987   2010Cell line : -

Source : Nanfang Hospital tumour tissue bank.

Sample Type : -

No. of Sample : -

Stage : -

2-D Gel electrophoresis, and mass spectrometry,Western blotting, ImmunohistochemistryUp-regulation-This gene differentially expressed in between normal colorectal tissue and colorectal cancer tissue experiment done by 2-D Gel eclectrophotesis

In total, 150 patients were involved in the study.

21215099   2010Cell line : SW480

Source : -

Sample Type : -

No. of Sample : -

Stage : -

RT-PCR , Western blotting, MTTUp-regulation-LASP-1 gene expression enhances proliferation of colorectal cancer cells and may serve as a useful marker for colorectal cancer progression.

20089989   2010Cell line : -

Source : VU University Medical Center, Amsterdam, The Netherlands.

Sample Type : CRC tumor and normal tissue

No. of Sample : -

Stage : -

Biochemical isolation to nano-LC-MS/MS analysis Up-regulation-This genes are differenitially expressed between colorectal adenoma and Colorectal cancer tissue.


Gene Details



Chromosome: 17; NC_000017.10 (37026112..37078023)

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Gene Type protein coding
Gene Family -
Description This gene encodes a member of a subfamily of LIM proteins, characterized by a LIM motif and a domain of Src homology region 3, and also a member of the nebulin family of actin-binding proteins. The encoded protein is a cAMP and cGMP dependent signaling protein and binds to the actin cytoskeleton at extensions of the cell membrane. The encoded protein has been linked to metastatic breast cancer, hematopoetic tumors such as B-cell lymphomas, and colorectal cancer. [provided by RefSeq, Oct 2012]  
Chromosome 17
Location 17q11-q21.
Start 38869859  
End 38921770  
Strand +  
Gene Sequence

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Length 51912  
OMIM ID 602920   
HGNC ID HGNC:6513   
Unigene ID Hs.741156   
Ensembl ID ENSG00000002834   
PharmGKB ID PA30298   

mRNA Information


mRNA ID NM_006148.3
Exon join(1..400,8228..8322,20562..20646,28554..28661, 44467..44617,45185..45288,48747..51912)  
mRNA Sequence

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Length 4135  



CDS Information


   
Locationjoin(332..400,8228..8322,20562..20646,28554..28661, 44467..44617,45185..45288,48747..48920)
CDS Sequence

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CCDS ID CCDS11331.1



Protein Information


      
Protein IDNP_006139.1
Protein NameLIM and SH3 protein 1
Molecular Wt. (Da)29586
Protein Sequence

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Length 261  
Uniprot IDP30304
Ensembl Protein ID ENSP00000303706  



Post-translational Modification Information (Source : HPRD)


Residue Type site
SPhosphorylation146
SPhosphorylation146
SPhosphorylation99
SPhosphorylation99
SPhosphorylation146
SPhosphorylation146
SPhosphorylation61
SPhosphorylation146
SPhosphorylation146
SPhosphorylation61
YPhosphorylation171
YPhosphorylation171
TPhosphorylation104;-
TPhosphorylation104;-
TPhosphorylation68;-
TPhosphorylation68;-
YPhosphorylation152
YPhosphorylation152
SPhosphorylation151
SPhosphorylation151
KAcetylation128
KAcetylation128
KAcetylation42
KAcetylation42
SPhosphorylation134
SPhosphorylation134
YPhosphorylation122
YPhosphorylation122
TPhosphorylation63
TPhosphorylation63
SPhosphorylation118
SPhosphorylation118
TPhosphorylation38
TPhosphorylation38
SPhosphorylation150
SPhosphorylation150

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                                                                                                                        
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
58ACTA130NP_001091.1in vitro12571245   
60ACTB32NP_001092.1in vitro;in vivo9848085   
70ACTC115NP_005150.1in vitro;in vivo9848085   
2275FHL39101NP_004459.2yeast 2-hybrid16189514   
4188MDFI7280NP_005577.1yeast 2-hybrid16189514   
5359PLSCR18855NP_066928.1yeast 2-hybrid16189514   
7791ZYX3592NP_003452.1in vitro15004028   
9319TRIP135145NP_004228.1yeast 2-hybrid16189514   


Pathway Information


No matching records could be found.

Structure Information


No matching records could be found.

Domain Information




ID Location Description
cd11934203-261  SH3_Lasp1_C
cl17036203-261  SH3 superfamily
cd09447May-57  LIM_LASP
cl02475May-57  LIM superfamily
cd11789206-260  SH3_Nebulin_family_C
cd09359May-57  LIM_LASP_like
cd11933204-261  SH3_Nebulin_C
cd11935207-261  SH3_Nebulette_C
cd09446May-56  LIM_N_RAP
cd09358May-57  LIM_Mical_like
smart00326203-259  SH3
cd11960206-259  SH3_Abp1_eu
cd11819208-259  SH3_Cortactin_like
cd11780206-260  SH3_Sorbs_3
smart00132May-56  LIM
cd11959209-260  SH3_Cortactin
cd00174206-257  SH3
cd08368May-57  LIM
pfam00412May-57  LIM
cd11882206-259  SH3_GRAF-like
pfam14604209-259  SH3_9
cd09401May-57  LIM_TLP_like
cd11961208-259  SH3_Abp1_fungi_C2
cd11824206-259  SH3_PSTPIP1
cd11791207-259  SH3_UBASH3
cd12073209-259  SH3_HS1
cd09443May-56  LIM_Ltd-1
cd11803207-261  SH3_Endophilin_A
cd11918204-261  SH3_Vinexin_3
cd11877207-259  SH3_PIX
cd11790206-261  SH3_Amphiphysin
cd11916207-261  SH3_Sorbs1_3
cd11826208-259  SH3_Abi
cd09326May-57  LIM_CRP_like
cd11823206-259  SH3_Nostrin
cd11772207-260  SH3_OSTF1
cd11788205-261  SH3_RasGAP
pfam00018208-255  SH3_1
cd11999204-259  SH3_PACSIN_like
cd09440May-57  LIM1_SF3
cd11917202-259  SH3_Sorbs2_3
cd11843206-259  SH3_PACSIN
cd09445May-57  LIM_Mical_like_2
cd11873211-259  SH3_CD2AP-like_1
cd11836206-260  SH3_Intersectin_1
cd09478May-54  LIM_CRIP
cd11818206-257  SH3_Eve1_5
cd09441May-57  LIM2_SF3
cd11763206-259  SH3_SNX9_like
cd11972209-261  SH3_Abi2
cd11998206-260  SH3_PACSIN1-2
cd11781208-259  SH3_Sorbs_1
cd11785206-259  SH3_SH3RF_C
cd09476May-58  LIM1_TLP
cd11971209-261  SH3_Abi1
cd11827206-259  SH3_MyoIe_If_like
cd11997204-259  SH3_PACSIN3
cd11821206-257  SH3_ASAP
cd11875206-259  SH3_CD2AP-like_3
cd11840208-259  SH3_Intersectin_5
cd09477May-58  LIM2_TLP
cd11962210-259  SH3_Abp1_fungi_C1
cd09481May-57  LIM1_CRP3
cd11779205-260  SH3_Irsp53_BAIAP2L
cd11874206-259  SH3_CD2AP-like_2
cd11786208-259  SH3_SH3RF_1
cd11920208-261  SH3_Sorbs2_1
cd09840May-57  LIM2_CRP2
cd11996209-259  SH3_Intersectin2_5
cd11778209-257  SH3_Bzz1_2
cd12061208-261  SH3_betaPIX
cd09482May-57  LIM2_CRP3
cd11856207-259  SH3_p47phox_like
cd11964205-260  SH3_STAM1
cd09402May-57  LIM1_CRP
cd11864208-259  SH3_PEX13_eumet
cd11825208-259  SH3_PLCgamma
cd11849207-259  SH3_SPIN90
cd11793209-260  SH3_ephexin1_like
cd12058207-258  SH3_MLK4
cd11897206-259  SH3_SNX18
cd11936208-258  SH3_UBASH3B
cd09442May-57  LIM_Eplin_like
cd09403May-57  LIM2_CRP
cd11775205-259  SH3_Sla1p_3
cd09404May-53  LIM1_MLP84B_like
cd11988207-259  SH3_Intersectin2_1
cd11783206-260  SH3_SH3RF_3
cd11805206-259  SH3_GRB2_like_C
cd09485May-57  LIM_Eplin_alpha_beta
cd11845207-257  SH3_Src_like
cd11926207-258  SH3_SH3RF1_3
cd12053211-261  SH3_CD2AP_1
cd11949208-260  SH3_GRB2_C
cd11817209-257  SH3_Eve1_4
cd11784206-258  SH3_SH3RF2_3
cd11896206-259  SH3_SNX33
smart0022798-128  NEBU
cl2304998-128  NEBU superfamily
cd11762208-259  SH3_FCHSD_2
cd11820205-260  SH3_STAM
cd11963205-258  SH3_STAM2
cd11912208-259  SH3_Bzz1_1
cd09486May-57  LIM_Eplin_like_1
pfam07653206-259  SH3_2
pfam0088067-95  Nebulin
cl2350367-95  Nebulin superfamily
pfam00880103-130  Nebulin
cl23503103-130  Nebulin superfamily
cd11816206-258  SH3_Eve1_3
cd09479May-57  LIM1_CRP1
cd11782208-259  SH3_Sorbs_2
cd11773207-257  SH3_Sla1p_1
cd12006207-258  SH3_Fyn_Yrk
cd11855206-259  SH3_Sho1p
cd11806207-258  SH3_PRMT2
cd11976208-259  SH3_VAV1_2
cd11884208-260  SH3_MYO15
cd11987207-259  SH3_Intersectin1_1
cd11923209-261  SH3_Sorbs2_2
cd12060208-261  SH3_alphaPIX
cd11766206-259  SH3_Nck_2
cd09480May-57  LIM1_CRP2
cd12052211-258  SH3_CIN85_1
cd11925207-261  SH3_SH3RF3_3
cd09364May-57  LIM1_LIMK
smart0022762-92  NEBU
cl2304962-92  NEBU superfamily
cd11769209-259  SH3_CSK
cd11937208-259  SH3_UBASH3A
cd11838206-258  SH3_Intersectin_3
cd09439May-57  LIM_Mical
cd11886207-257  SH3_BOI
cd11812209-258  SH3_AHI-1
cd09329May-57  LIM3_abLIM
cd11804208-258  SH3_GRB2_like_N
cd11887206-259  SH3_Bbc1
cd11842208-260  SH3_Ysc84p_like
cd11919205-261  SH3_Sorbs1_1
cd12055206-259  SH3_CIN85_2
cd11991207-258  SH3_Intersectin1_3
cd11950208-259  SH3_GRAP2_C
cd11948209-259  SH3_GRAP_N
cd12057208-259  SH3_CIN85_3
cd11992207-258  SH3_Intersectin2_3
cd11969208-261  SH3_PLCgamma2
cd12054205-261  SH3_CD2AP_2
cd11876209-258  SH3_MLK
cd12007207-258  SH3_Yes
cd11928208-259  SH3_SH3RF3_1
cd09350May-57  LIM1_TRIP6
cd12076205-259  SH3_Tks4_2
cd11924209-259  SH3_Vinexin_2
cd11796206-258  SH3_DNMBP_N3
cd11970208-261  SH3_PLCgamma1
cd11938213-255  SH3_ARHGEF16_26
cd12066208-259  SH3_GRAF3
cd09351May-57  LIM1_LPP
cd11889208-258  SH3_Cyk3p-like
cd09450May-56  LIM_ALP
cd12022207-259  SH3_p47phox_2
cd11921205-261  SH3_Vinexin_1
cd11922209-261  SH3_Sorbs1_2
cd09414May-57  LIM1_LIMPETin
cd12059209-258  SH3_MLK1-3
cd11929206-259  SH3_SH3RF2_1
cd11951208-258  SH3_GRAP_C
cd11774208-258  SH3_Sla1p_2
cd11995209-259  SH3_Intersectin1_5
cd11837206-258  SH3_Intersectin_2
cd11915206-261  SH3_Irsp53
cd12065208-259  SH3_GRAF2
cd12142207-259  SH3_D21-like
cd11947208-259  SH3_GRAP2_N
cd11776206-261  SH3_PI3K_p85
cd09438May-42  LIM3_Ajuba_like
cd09456May-57  LIM2_Enigma
cd11809209-258  SH3_srGAP
cd09340May-57  LIM1_Testin_like
cd11870209-259  SH3_p67phox-like_C
cd11901211-258  SH3_Nck1_2
cd11869206-261  SH3_p40phox
cd11927208-259  SH3_SH3RF1_1
cd11810206-257  SH3_RUSC1_like
cd09379May-57  LIM2_AWH
cd12077205-259  SH3_Tks5_2
cd11885206-258  SH3_SH3TC
cd11833207-258  SH3_Stac_1
cd12008207-258  SH3_Src
cd11758208-260  SH3_CRK_N
cd12046209-259  SH3_p67phox_C
cd11914205-261  SH3_BAIAP2L2
cd11913205-257  SH3_BAIAP2L1
cd11771208-259  SH3_Pex13p_fungal
cd12064205-259  SH3_GRAF
cd12051209-258  SH3_DOCK1_5_A
cd12074206-260  SH3_Tks5_1
cd09396May-52  LIM_DA1
cd11829206-258  SH3_GAS7
cd11946209-259  SH3_GRB2_N
cd11828209-258  SH3_ARHGEF9_like
cd09451May-56  LIM_RIL
cd12013206-259  SH3_RIM-BP_3
cd11830209-259  SH3_VAV_2
cd09346May-53  LIM3_FHL
cd11807209-257  SH3_ASPP
cd09462Mar-57  LIM1_LIMK1
cd11910204-261  SH3_PI3K_p85alpha
cd09421May-57  LIM3_LIMPETin
cd11801207-258  SH3_JIP1_like
cd11945203-259  SH3_Endophilin_B1
cd11939210-259  SH3_ephexin1
cd09463May-57  LIM1_LIMK2
cd11940213-259  SH3_ARHGEF5_19
cd09349Feb-57  LIM1_Zyxin
cd11839208-259  SH3_Intersectin_4
cd11978209-259  SH3_VAV3_2
cd11944206-259  SH3_Endophilin_B2
cd09357May-42  LIM3_Zyxin_like
cd09377May-57  LIM2_Lhx2_Lhx9
cd11954209-256  SH3_ASPP1
cd09422May-60  LIM1_FHL2
cd11952209-257  SH3_iASPP
cd11878208-257  SH3_Bem1p_1
cd09362May-57  LIM2_Enigma_like
cd11858206-259  SH3_Myosin-I_fungi
cd12139206-245  SH3_Bin1
cd11965206-258  SH3_ASAP1
cd11865209-259  SH3_Nbp2-like
cd09426May-60  LIM2_FHL2
cd09457May-57  LIM2_ENH
cd11815210-259  SH3_Eve1_2
cd12047206-258  SH3_Noxa1_C
cd09360May-56  LIM_ALP_like
cd09345May-54  LIM2_FHL
cd09431May-53  LIM3_Fhl2
cd09338May-57  LIM3_Paxillin_like
cd11943207-257  SH3_JIP1
cd11894208-259  SH3_FCHSD2_2
cd09343May-57  LIM1_FHL
cd11847207-258  SH3_Brk
cd09430May-53  LIM5_LIMPETin
cd11902211-258  SH3_Nck2_2
cd11879211-259  SH3_Bem1p_2
cd11883208-257  SH3_Sdc25
cd11881209-258  SH3_MYO7A
cd11898208-261  SH3_SNX9
cd09341Mar-53  LIM2_Testin_like
cd11802206-257  SH3_Endophilin_B
cd11770206-260  SH3_Nephrocystin
cd09427Apr-57  LIM2_FHL3
cd11942207-260  SH3_JIP2
cd09363May-56  LIM3_Enigma_like
cd09429May-53  LIM3_FHL1
cd09382May-57  LIM2_Lhx6
cd11777208-258  SH3_CIP4_Bzz1_like
cd09418Mar-53  LIM2_Prickle
cd11866207-258  SH3_SKAP1-like
cd0941322-57  LIM1_Testin
cd12016206-259  SH3_Tks_2
cd09336May-57  LIM1_Paxillin_like
cd09461May-56  LIM3_Enigma_like_1
cd09394May-40  LIM1_Rga
cd11966206-258  SH3_ASAP2
cd12045207-258  SH3_SKAP2
cd12021207-259  SH3_p47phox_1
cd09409May-57  LIM3_Paxillin
cd12056208-258  SH3_CD2AP_3
cd09400May-53  LIM_like_1
cd11795212-259  SH3_DNMBP_N2
cd09393May-54  LIM3_Lrg1p_like
cd11761209-260  SH3_FCHSD_1
cd09383May-57  LIM2_Lhx7_Lhx8
cd11813206-259  SH3_SGSM3
cd11841209-258  SH3_SH3YL1_like
cd11986207-258  SH3_Stac3_1
cd09334Mar-57  LIM4_PINCH
cd09367May-53  LIM1_Lhx1_Lhx5
cd09331May-53  LIM1_PINCH
cd09428May-53  LIM2_FHL5
cd12003208-261  SH3_EFS
cd11977209-259  SH3_VAV2_2
cd11787208-257  SH3_SH3RF_2
cd12009207-258  SH3_Blk
cd11911208-259  SH3_CIP4-like
cd11797209-254  SH3_DNMBP_N4
cd11854207-255  SH3_Fus1p
cd09335May-57  LIM5_PINCH
cd0945817-56  LIM3_Enigma
cd0939725-57  LIM1_UF1
cd11909206-261  SH3_PI3K_p85beta
cd11857206-256  SH3_DBS
cd11800207-257  SH3_DNMBP_C2_like
cd09388May-39  LIM1_LMO1_LMO3
cd11955209-258  SH3_srGAP1-3
cd09370May-57  LIM1_Lmx1a
cd11767208-259  SH3_Nck_3
cd09412May-57  LIM4_Leupaxin
cd09444May-45  LIM_Mical_like_1
cd11844208-259  SH3_CAS
cd09416Mar-57  LIM2_Testin
cd09376May-40  LIM2_Lhx3_Lhx4


Ontology Information


   
HPRD ID309
Molecular ClassCytoskeletal associated protein
Molecular FunctionGTPase activity (GO:0003924)
Biological ProcessCell communication (GO:0007154); Signal transduction (GO:0007165)  



SNP Information


View SNP Geneview Report   

Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO