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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
NEAT1 283131 nuclear paraspeckle assembly transcript 1 (non-protein coding)  11TncRNA, MENepsilon/beta, LINC00084, VINC 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
26314847   2015Cell line : -

Source : -

Sample Type : CRC tumor and normal tissue

No. of Sample : 239

Stage : TNM Stage I-IV

-Up-regulation-NEAT1 may serve as an indicator of tumor recurrence and prognosis of colorectal cancer.


Gene Details



NC_000011.9 (65190269..65194003)

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Gene Type protein coding
Gene Family Long non-coding RNAs, "-"
Description This gene produces a long non-coding RNA (lncRNA) transcribed from the multiple endocrine neoplasia locus. This lncRNA is retained in the nucleus where it forms the core structural component of the paraspeckle sub-organelles. It may act as a transcriptional regulator for numerous genes, including some genes involved in cancer progression. [provided by RefSeq, Mar 2015]  
Chromosome 11
Location 11q13.1
Start 65190269  
End 65194003  
Strand +  
Gene Sequence

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Length 3735  
OMIM ID 612769   
HGNC ID HGNC:30815   
Unigene ID -   
Ensembl ID ENSG00000245532   
PharmGKB ID -   

mRNA Information


mRNA ID
Exon  
mRNA Sequence

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Length  



CDS Information


   
Location
CDS Sequence

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CCDS ID -



Protein Information


      
Protein ID
Protein Namenuclear paraspeckle assembly transcript 1 (non-protein coding)
Molecular Wt. (Da)0
Protein Sequence

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Length 0  
Uniprot ID
Ensembl Protein ID  



Post-translational Modification Information (Source : HPRD)


No matching records could be found.

Enzyme Information


No matching records could be found.

PPi Information


No STRING Network could be found.

No matching records from HPRD source could be found.

Pathway Information


No matching records could be found.

Structure Information


No matching records could be found.

Domain Information


No matching records could be found.

Ontology Information


   
HPRD ID-
Molecular ClassNot Available
Molecular Function-
Biological Process-  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO