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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
NTN4 59277 netrin 4  12- 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
23124703   2013Cell line : 2 human colon cancer cells lines: wild-type (low expression of NT-4) and NT-4 (overexpression of NT-4) LS174 cells.

Source : -

Sample Type : -

No. of Sample : -

Stage : -

-Down-regulation-NT-4 may hold therapeutic potential in the treatment of colorectal cancer growth and major metastatic sites.


Gene Details



NC_000012.11 (96051583..96184565, complement)

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Gene Type protein coding
Gene Family Netrins
Description NTN4 belongs to a family of proteins related to laminins (see LAMA1, MIM 150320) Koch et al. (2000) [PubMed 11038171].[supplied by OMIM, Mar 2008]  
Chromosome 12
Location 12q22
Start 96051583  
End 96184565  
Strand -  
Gene Sequence

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Length 132983  
OMIM ID 610401   
HGNC ID HGNC:13658   
Unigene ID Hs.201034   
Ensembl ID ENSG00000074527   
PharmGKB ID PA31815   

mRNA Information


mRNA ID ?NM_021229.3
Exon  
mRNA Sequence

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Length  



CDS Information


   
Location
CDS Sequence

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CCDS ID CCDS9054.1



Protein Information


      
Protein IDNP_067052.2
Protein Namenetrin 4
Molecular Wt. (Da)0
Protein Sequence

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Length 628  
Uniprot IDQ9BT81
Ensembl Protein ID ENSP00000301921  



Post-translational Modification Information (Source : HPRD)


No matching records could be found.

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

               
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
54507ADAMTSL418237NP_061905.2yeast 2-hybrid16189514   


Pathway Information


      
Pathway Name Pathway ID
Axon guidance hsa04360


Structure Information


No matching records could be found.

Domain Information




ID Location Description
cd03578516-626  NTR_netrin-4_like
cl02512516-626  NTR_like superfamily
cd00055394-445  EGF_Lam
cl22875394-445  EGF_Lam superfamily
cd00055261-320  EGF_Lam
cl22875261-320  EGF_Lam superfamily
cd00055332-381  EGF_Lam
cl22875332-381  EGF_Lam superfamily
smart0013628-260  LamNT
cl0280628-260  Laminin_N superfamily
pfam0005534-260  Laminin_N
cd03523517-626  NTR_like
pfam01759519-624  NTR
smart00643517-624  C345C
cd03581524-619  NTR_Sfrp3_like
smart00180395-446  EGF_Lam
pfam00053395-449  Laminin_EGF
cd03579517-626  NTR_netrin-1_like
pfam00053332-385  Laminin_EGF
pfam00053262-321  Laminin_EGF
smart00180332-381  EGF_Lam
cd03574524-611  NTR_complement_C345C
smart00180287-317  EGF_Lam


Ontology Information


   
HPRD ID9555
Molecular ClassExtracellular matrix protein
Molecular FunctionCytoskeletal protein binding (GO:0008092)
Biological ProcessCell growth and/or maintenance (GO:0008151)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO