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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
NUP160 23279 Nucleoporin 160kDa  11- 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
20089989   2010Cell line : -

Source : VU University Medical Center, Amsterdam, The Netherlands.

Sample Type : CRC tumor and normal tissue

No. of Sample : -

Stage : TNM Stage II

Biochemical isolation to nano-LC-MS/MS analysisUnknown--


Gene Details



Chromosome: 11; NC_000011.9 (47799670..47870057, complement)

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Gene Type protein coding
Gene Family -
Description NUP160 is 1 of up to 60 proteins that make up the 120-MD nuclear pore complex, which mediates nucleoplasmic transport.[supplied by OMIM, Apr 2004]  
Chromosome 11
Location 11p11.2
Start 47778113  
End 47848505  
Strand +  
Gene Sequence

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Length 70393  
OMIM ID 607614   
HGNC ID HGNC:18017   
Unigene ID Hs.744107   
Ensembl ID ENSG00000030066   
PharmGKB ID -   

mRNA Information


mRNA ID XM_006718170.2
Exon join(8473..8663,10883..10961,11505..11619,12697..12855, 26342..26419,26685..26782,29048..29132,30382..30450, 32477..32560,32857..33027,35091..35190,35459..35639, 36077..36204,36282..36442,39977..40110,41366..41436, 42194..42353,43888..43957,44970..45068,46576..46695, 50043..50138,50244..50338,50432..50528,50622..50727, 55560..55720,56516..56576,59895..60005,60201..60324, 61952..62053,63443..63584,65308..65433,68059..68163, 69312..70393)  
mRNA Sequence

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Length 4761  



CDS Information


   
Location join(86..287,547..658,7918..8128,8441..8663,10883..10961, 11505..11619,12697..12855,26342..26419,26685..26782, 29048..29132,30382..30450,32477..32560,32857..33027, 35091..35190,35459..35624,36077..36204,36282..36442, 39977..40110,41366..41436,42194..42353,43888..43957, 44970..45068,46576..46695,50043..50138,50244..50338, 50432..50528,50622..50727,55560..55720,56516..5657
CDS Sequence

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CCDS ID CCDS31484.1



Protein Information


      
Protein IDNP_056046.1
Protein NameNucleoporin 160kDa
Molecular Wt. (Da)161991
Protein Sequence

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Length 1436  
Uniprot IDQ01844
Ensembl Protein ID ENSP00000331699  



Post-translational Modification Information (Source : HPRD)


Residue Type site
SPhosphorylation1157
YPhosphorylation1151
SPhosphorylation1147

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

No matching records from HPRD source could be found.

Pathway Information


      
Pathway Name Pathway ID
RNA transport hsa03013


Structure Information


No matching records could be found.

Domain Information




ID Location Description
pfam14961464-675  BROMI
cl20842464-675  BROMI superfamily
pfam1171562-577  Nup160


Ontology Information


   
HPRD ID7524
Molecular ClassTransport/cargo protein
Molecular FunctionCatalytic activity (GO:0003824)
Biological ProcessProtein metabolism (GO:0019538)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO