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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
PPP1R3C 5507 protein phosphatase 1, regulatory subunit 3C  10PTG 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
24861485   2014Cell line : -

Source : Department of Digestive Surgery, Graduate School of Medicine, Nihon University.�

Sample Type : Peripheral blood

No. of Sample : 120 patients undergoing surgical operations for CRC (CRC group).Corresponding primary CRC tissue samples were also collected from 24 CRC patients.

Stage : TNM Stage I-IV.

Methylation-specific PCR,Pyrosequencing analysis.Methylation-PPP1R3C methylation or its combined use of EFHD1 methylation was highly positive in CRC plasma samples, and they might be useful in detection of CRC, especially for early-stage CRCs.


Gene Details



NC_000010.10 (93388197..93392858, complement)

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Gene Type protein coding
Gene Family Serine/threonine phosphatases / Protein phosphatase 1, regulatory subunits
Description This gene encodes a regulatory subunit of protein phosphatase-1 (PP1). PP1 catalyzes reversible protein phosphorylation, which is important in a wide range of cellular activities: neuronal, muscular, RNA splicing, protein synthesis, cell death, and glycogen metabolism, to name just a few. By interacting with different regulatory subunits, PP1 is directed to different parts of the cell, to different substrates, or to respond to extracellular signals. [provided by RefSeq, Oct 2011]  
Chromosome 10
Location 10q23-q24
Start 93388197  
End 93392858  
Strand -  
Gene Sequence

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Length 4662  
OMIM ID 602999   
HGNC ID HGNC:9293   
Unigene ID Hs.303090   
Ensembl ID ENSG00000119938   
PharmGKB ID PA33653   

mRNA Information


mRNA ID ?NM_005398.5
Exon join(1..146,2236..4662)  
mRNA Sequence

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Length 2576  



CDS Information


   
Location 133..1086
CDS Sequence

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CCDS ID CCDS7416.1



Protein Information


      
Protein IDNP_005389.1
Protein Nameprotein phosphatase 1, regulatory subunit 3C
Molecular Wt. (Da)103785
Protein Sequence

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Length 317  
Uniprot IDO00311
Ensembl Protein ID ENSP00000234626  



Post-translational Modification Information (Source : HPRD)


No matching records could be found.

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

No matching records from HPRD source could be found.

Pathway Information


            
Pathway Name Pathway ID
Insulin resistance hsa04931
Insulin signaling pathway hsa04910


Structure Information


No matching records could be found.

Domain Information




ID Location Description
pfam03370153-256  CBM_21
cl08388153-256  CBM_21 superfamily
pfam03423172-256  CBM_25
cl04060172-256  CBM_25 superfamily


Ontology Information


   
HPRD ID5203
Molecular ClassRegulatory/other subunit
Molecular FunctionG-protein coupled receptor activity (GO:0004930)
Biological ProcessCell communication (GO:0007154); Signal transduction (GO:0007165)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO