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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
RREB1 6239 Ras responsive element binding protein 1  6HNT; FINB; LZ321; Zep-1; RREB-1 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
22751122   2012Cell line : HCT 116

Source : -

Sample Type : -

No. of Sample : -

Stage : -

-Up-regulation-RREB1 is overexpressed in colorectal adenocarcinoma tumors and cell lines, and the expression of the miR-143/145 primary transcript is inversely related to RREB1 expression.


Gene Details



Chromosome: 6; NC_000006.11 (7107830..7252213)

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Gene Type protein coding
Gene Family Zinc fingers, C2H2-type
Description The protein encoded by this gene is a zinc finger transcription factor that binds to RAS-responsive elements (RREs) of gene promoters. It has been shown that the calcitonin gene promoter contains an RRE and that the encoded protein binds there and increases expression of calcitonin, which may be involved in Ras/Raf-mediated cell differentiation. Multiple transcript variants encoding several different isoforms have been found for this gene. [provided by RefSeq, Dec 2009]  
Chromosome 6
Location 6p25
Start 7107597  
End 7251980  
Strand +  
Gene Sequence

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Length 144384  
OMIM ID 602209   
HGNC ID HGNC:10449   
Unigene ID Hs.298248   
Ensembl ID ENSG00000124782   
PharmGKB ID -   

mRNA Information


mRNA ID NM_001168344.1
Exon join(1..172,69059..69177,73528..73650,74274..74486, 79838..79927,81563..81726,103208..103352,103977..104113, 118871..119060,121401..124311,138828..139625, 140915..144384)  
mRNA Sequence

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Length 8532  



CDS Information


   
Location join(73645..73650,79838..79927,81563..81726, 103208..103352,103977..104113,118871..119060, 121401..124311,132842..133006,138828..139625, 140915..141372)
CDS Sequence

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CCDS ID -



Protein Information


      
Protein IDNP_001003698.1
Protein NameRas responsive element binding protein 1
Molecular Wt. (Da)181290
Protein Sequence

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Length 1687  
Uniprot IDP16410
Ensembl Protein ID ENSP00000295854  



Post-translational Modification Information (Source : HPRD)


Residue Type site
SPhosphorylation1167
SPhosphorylation36
SPhosphorylation1167
SPhosphorylation36
SPhosphorylation1167
SPhosphorylation36
KSumoylation615
KSumoylation885
KSumoylation913
KSumoylation615
KSumoylation885
KSumoylation913
KSumoylation615
KSumoylation885
KSumoylation913
SPhosphorylation1388;-
SPhosphorylation1388;-
SPhosphorylation1443;-
TPhosphorylation1318;-
TPhosphorylation1318;-
TPhosphorylation1373;-
SPhosphorylation1174
SPhosphorylation1175
SPhosphorylation1174
SPhosphorylation1175
SPhosphorylation1174
SPhosphorylation1175
SPhosphorylation42
SPhosphorylation42
SPhosphorylation42
SPhosphorylation1219
SPhosphorylation1219
SPhosphorylation1219
SPhosphorylation1225
SPhosphorylation1225
SPhosphorylation1225
TPhosphorylation1121
TPhosphorylation1121
TPhosphorylation1121
SPhosphorylation231
SPhosphorylation231
SPhosphorylation231
TPhosphorylation1267
SPhosphorylation1271
TPhosphorylation1267
SPhosphorylation1271
TPhosphorylation1315
TPhosphorylation1315
TPhosphorylation1370
SPhosphorylation1320
SPhosphorylation1320
SPhosphorylation1375
SPhosphorylation1653
SPhosphorylation1653
SPhosphorylation1708
SPhosphorylation1122
SPhosphorylation1122
SPhosphorylation1122
SPhosphorylation161
SPhosphorylation161
SPhosphorylation161
SPhosphorylation1489
SPhosphorylation1489
SPhosphorylation1544
SPhosphorylation1585
SPhosphorylation1585
SPhosphorylation1640
SPhosphorylation1103
SPhosphorylation1103
SPhosphorylation1103
TPhosphorylation31
TPhosphorylation31
TPhosphorylation31
SPhosphorylation120
SPhosphorylation120
SPhosphorylation120
TPhosphorylation628
TPhosphorylation628
TPhosphorylation628
TPhosphorylation1120
TPhosphorylation1120
TPhosphorylation1120

Enzyme Information


No matching records could be found.

PPi Information


No STRING Network could be found.

               
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
4760NEUROD13428NP_002491.2in vitro12482979   


Pathway Information


No matching records could be found.

Structure Information


PDB ID1S1G
Resolution2.3
MethodX-RAY DIFFRACTION
Chains A,B  
Molecule Potassium voltage-gated channel subfamily D member 3  
Model View



Domain Information




ID Location Description
pfam134651526-1550  zf-H2C2_2
cl223751526-1550  zf-H2C2_2 superfamily
pfam13465111-136  zf-H2C2_2
cl22375111-136  zf-H2C2_2 superfamily
pfam13465685-709  zf-H2C2_2
cl22375685-709  zf-H2C2_2 superfamily
pfam00096125-147  zf-C2H2
cl23491125-147  zf-C2H2 superfamily
pfam032471421-1498  Prothymosin
cl039591421-1498  Prothymosin superfamily
smart00355125-147  ZnF_C2H2
cl18194125-147  ZnF_C2H2 superfamily
COG504864-246  COG5048
pfam052791412-1512  Asp-B-Hydro_N
PRK131081422-1493  PRK13108
pfam051091011-1330  Herpes_BLLF1
PHA03307939-1230  PHA03307
COG518935-145  SFP1
pfam102431390-1672  MIP-T3


Ontology Information


   
HPRD ID291
Molecular ClassTranscription factor
Molecular FunctionAspartic-type signal peptidase activity (GO:0009049)
Biological ProcessProtein metabolism (GO:0019538)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO