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General Information



Gene_Symbol Gene_ID Gene_Name Chromosome Alias
TEAD1 7003 TEA domain family member 1 (SV40 transcriptional enhancer factor)  11TEF-1 







  • Evidence
  • Gene
  • mRNA
  • CDS
  • Protein
  • PTM
  • Enzyme
  • PPi
  • Pathway
  • Structural
  • Domain
  • Ontology
  • SNP
  • Drug
  • External Links



Evidence Information


Pubmed ID Year Sample Information Techniques Mechanism Fold Change Remark
26435499   2015Cell line : 5 CRC cell lines

Source : -

Sample Type : CRC tumor and normal tissue

No. of Sample : CRC tissues 151 normal colorectal mucosa 30

Stage : -

real time RT-PCR, methylation specific PCR and bisulfite sequencing PCRMethylation- TCF21 may function as a tumor suppressor gene, which is downregulated through promoter hypermethylation in CRC development.


Gene Details



NC_000011.9 (12695969..12966284)

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Gene Type protein coding
Gene Family -
Description This gene encodes a ubiquitous transcriptional enhancer factor that is a member of the TEA/ATTS domain family. This protein directs the transactivation of a wide variety of genes and, in placental cells, also acts as a transcriptional repressor. Mutations in this gene cause Sveinsson's chorioretinal atrophy. Additional transcript variants have been described but their full-length natures have not been experimentally verified. [provided by RefSeq, May 2010]  
Chromosome 11
Location 11p15.4
Start 12695969  
End 12966284  
Strand +  
Gene Sequence

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Length 270316  
OMIM ID 189967   
HGNC ID HGNC:11714   
Unigene ID Hs.655331   
Ensembl ID -   
PharmGKB ID PA36432   

mRNA Information


mRNA ID ?NM_021961.5
Exon join(1..413,988..1140,89758..90013,187829..187893, 190417..190479,205287..205421,206584..206630, 207475..207536,208580..208704,227519..227692, 250491..250631,255753..255905,262688..270316)  
mRNA Sequence

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Length 9433  



CDS Information


   
Location 621..1901
CDS Sequence

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CCDS ID CCDS7810.2



Protein Information


      
Protein IDNP_068780.2
Protein NameTEA domain family member 1 (SV40 transcriptional enhancer factor)
Molecular Wt. (Da)48198
Protein Sequence

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Length 426  
Uniprot IDO75367
Ensembl Protein ID ENSP00000302572  



Post-translational Modification Information (Source : HPRD)


Residue Type site
SPhosphorylation87

Enzyme Information


No matching records could be found.

PPi Information


(Click to view network : Source STRING)      View   

                                                                           
Interactant Gene ID (Source: HPRD) Gene Symbol HPRD ID Ref Seq ID Technique References
4149MAX1113NP_002373.3in vitro;in vivo9199327   
4207MEF2B2808NP_005910.1in vitro12861002   
4208MEF2C2809NP_002388.2in vitro12861002   
4625MYH71175NP_000248.2in vitro;yeast 2-hybrid825   379   712   861   002   
6908TBP2511NP_003185.1in vitro8423815   


Pathway Information


      
Pathway Name Pathway ID
Hippo signaling pathway hsa04390


Structure Information


No matching records could be found.

Domain Information




ID Location Description
pfam012856-418  TEA
cl026036-418  TEA superfamily
smart0042630-97  TEA


Ontology Information


   
HPRD ID9259
Molecular ClassTranscription factor
Molecular FunctionMolecular function unknown (GO:0005554)
Biological ProcessBiological_process unknown (GO:0000004)  



SNP Information


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Drug Information


No matching records could be found.

External Links


                                 
ArrayExpressGO
ICGCGO
Cancer3DGO
COSMICGO
NCGGO
TSGeneGO
Tumor Gene Family of DatabasesGO
CCDBGO
G2SBCGO
Osteosarcoma DatabaseGO
RCDBGO